Basic Vector Information
- Vector Name:
- pPlat-Pds-Mod4.1
- Antibiotic Resistance:
- Ampicillin
- Length:
- 8742 bp
- Type:
- Cloning vector
- Replication origin:
- ori
- Source/Author:
- Steinbrenner J, Sandmann G.
pPlat-Pds-Mod4.1 vector Map
pPlat-Pds-Mod4.1 vector Sequence
LOCUS 40924_34924 8742 bp DNA circular SYN 18-DEC-2018
DEFINITION Cloning vector pPlat-Pds-Mod4.1, complete sequence.
ACCESSION .
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 8742)
AUTHORS Steinbrenner J, Sandmann G.
TITLE Transformation of the green alga Haematococcus pluvialis with a
phytoene desaturase for accelerated astaxanthin biosynthesis
JOURNAL Appl. Environ. Microbiol. 72 (12), 7477-7484 (2006)
PUBMED 17012596
REFERENCE 2 (bases 1 to 8742)
AUTHORS Steinbrenner J, Sandmann G.
TITLE Direct Submission
JOURNAL Submitted (16-FEB-2006) Plant Physiology and Biochemistry,
University of Konstanz, Universitaetsstr. 10, Konstanz 78457,
Germany
REFERENCE 3 (bases 1 to 8742)
TITLE Direct Submission
REFERENCE 4 (bases 1 to 8742)
AUTHORS .
TITLE Direct Submission
COMMENT SGRef: number: 1; type: "Journal Article"; journalName: "Appl.
Environ. Microbiol."; date: "2006"; volume: "72"; issue: "12";
pages: "7477-7484"
COMMENT SGRef: number: 2; type: "Journal Article"; journalName: "Submitted
(16-FEB-2006) Plant Physiology and Biochemistry, University of
Konstanz, Universitaetsstr. 10, Konstanz 78457, Germany"
COMMENT SGRef: number: 3; type: "Journal Article"
COMMENT Name: pPlat-Pds-Mod4.1.
FEATURES Location/Qualifiers
source 1..8742
/mol_type="other DNA"
/organism="synthetic DNA construct"
gene 134..5825
/gene="pdsMod4.1"
/label=pdsMod4.1
regulatory 134..2140
/gene="pdsMod4.1"
/label=derived from the phytoene desaturase gene
/note="derived from the phytoene desaturase gene"
/regulatory_class="promoter"
mRNA join(2141..2510,2600..2712,2818..3184,3537..3671,3965..4043,
4394..4743,4974..5044,5222..5825)
/gene="pdsMod4.1"
/product="phytoene desaturase"
/label=pdsMod4.1 mRNA
CDS join(2181..2510,2600..2712,2818..3184,3537..3671,3965..4043,
4394..4743,4974..5044,5222..5489)
/codon_start=1
/gene="pdsMod4.1"
/product="phytoene desaturase"
/label=pdsMod4.1
/protein_id="ABG29431.1"
/translation="MQTTMRGQASGSGCTSGRQARGHWSRRSVRERGALRVVAKDYPTP
DFQSSDTYQEALSLSTKLRNAPRPAKPLRVVIAGAGLAGLSAAKYLADAGHHPVVLEGR
DVLGGKVAAWKDEDGDWYETGLHIFFGAYPNIQNLFKELGIQDRLQWKEHSMIFAMPDA
PGEFSRFDFPELPAPWNGIIAILRNNQMLSWPEKIRFRIGLLPAIIFGQRYCEEQDELT
VTEWMRKQGVPDRVNEEVFIAMAKALNFINPDDLSMTVVLTALNRFLQEQHGSKMAFLD
GAPPERLCQPMVDYFKARGGDLMFNSRVKQIVLNDDKSVKHLALTNGQTVEGDLYISAM
PVDIMKILMPDPWASMPYFKQLNGLEGVPVINIHIWFDRKLTTVDHLLFSRSPLLSVYA
DMSTTSKEYRDDKKSMLELVFAPAKEWIGRPDEEIIAATMTELERLFPTEVRADQSMAK
ILKYKVVKTPLSVYKSTAGREKFRPTQRSPISNFYLAGDYTKQKYRASMEGAVFSGKLV
TEAIVEDWSARGVTSSAASRQPALAAAGVVGRVGSSDWARWLQPVGAIAGGCK"
primer_bind 6387..6403
/label=M13 fwd
/note="common sequencing primer, one of multiple similar
variants"
promoter 6410..6428
/label=T7 promoter
/note="promoter for bacteriophage T7 RNA polymerase"
misc_feature complement(6437..6544)
/label=MCS
/note="pBluescript multiple cloning site"
promoter complement(6557..6575)
/label=T3 promoter
/note="promoter for bacteriophage T3 RNA polymerase"
primer_bind complement(6596..6612)
/label=M13 rev
/note="common sequencing primer, one of multiple similar
variants"
protein_bind complement(6620..6636)
/label=lac operator
/note="The lac repressor binds to the lac operator to
inhibit transcription in E. coli. This inhibition can be
relieved by adding lactose or
isopropyl-beta-D-thiogalactopyranoside (IPTG)."
promoter complement(6644..6674)
/label=lac promoter
/note="promoter for the E. coli lac operon"
protein_bind complement(6689..6710)
/label=CAP binding site
/note="CAP binding activates transcription in the presence
of cAMP."
rep_origin complement(6998..7586)
/direction=LEFT
/label=ori
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
CDS complement(7760..8617)
/label=AmpR
/note="beta-lactamase"
promoter complement(8618..8722)
/label=AmpR promoter
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