Basic Vector Information
- Vector Name:
- pPIPRA560
- Antibiotic Resistance:
- Kanamycin
- Length:
- 9273 bp
- Type:
- Binary vector
- Replication origin:
- ori
- Source/Author:
- Chi-Ham CL, Boettiger S, Figueroa-Balderas R, Bird S, Geoola JN, Zamora P, Alandete-Saez M, Bennett AB.
pPIPRA560 vector Map
pPIPRA560 vector Sequence
LOCUS 40924_34674 9273 bp DNA circular SYN 18-DEC-2018
DEFINITION Binary vector pPIPRA560, complete sequence.
ACCESSION .
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 9273)
AUTHORS Chi-Ham CL, Boettiger S, Figueroa-Balderas R, Bird S, Geoola JN,
Zamora P, Alandete-Saez M, Bennett AB.
TITLE An intellectual property sharing initiative in agricultural
biotechnology: development of broadly accessible technologies for
plant transformation
JOURNAL Plant Biotechnol. J. 10 (5), 501-510 (2012)
PUBMED 22221977
REFERENCE 2 (bases 1 to 9273)
AUTHORS Chi-Ham CL, Geoola JN, Figueroa-Balderas R, Bird S, Zamora P,
Boettiger S, Bennett AB.
TITLE Direct Submission
JOURNAL Submitted (15-APR-2011) Plant Sciences, UCDavis, One Shields Avenue,
Davis, CA 95616, USA
REFERENCE 3 (bases 1 to 9273)
TITLE Direct Submission
REFERENCE 4 (bases 1 to 9273)
AUTHORS .
TITLE Direct Submission
COMMENT SGRef: number: 1; type: "Journal Article"; journalName: "Plant
Biotechnol. J."; date: "2012"; volume: "10"; issue: "5"; pages:
"501-510"
COMMENT SGRef: number: 2; type: "Journal Article"; journalName: "Submitted
(15-APR-2011) Plant Sciences, UCDavis, One Shields Avenue, Davis, CA
95616, USA"
COMMENT SGRef: number: 3; type: "Journal Article"
FEATURES Location/Qualifiers
source 1..9273
/mol_type="other DNA"
/organism="synthetic DNA construct"
misc_feature 245..269
/label=LB T-DNA repeat
/note="left border repeat from nopaline C58 T-DNA"
regulatory 350..1300
/gene="FMV34S"
/regulatory_class="promoter"
gene 350..1300
/gene="FMV34S"
/label=FMV34S
CDS 1318..2106
/label=NeoR/KanR
/note="aminoglycoside phosphotransferase"
terminator 2127..2379
/label=MAS terminator
/note="mannopine synthase terminator"
misc_feature 2481..2505
/label=RB T-DNA repeat
/note="right border repeat from nopaline C58 T-DNA"
CDS 3957..4583
/label=pVS1 StaA
/note="stability protein from the Pseudomonas plasmid pVS1
(Heeb et al., 2000)"
CDS 5015..6085
/label=pVS1 RepA
/note="replication protein from the Pseudomonas plasmid
pVS1 (Heeb et al., 2000)"
rep_origin 6154..6348
/label=pVS1 oriV
/note="origin of replication for the Pseudomonas plasmid
pVS1 (Heeb et al., 2000)"
misc_feature 6822..6962
/label=bom
/note="basis of mobility region from pBR322"
rep_origin complement(7148..7736)
/direction=LEFT
/label=ori
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
CDS complement(8204..8995)
/label=KanR
/note="aminoglycoside phosphotransferase"
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