Basic Vector Information
- Vector Name:
- pFS84-CMV-pfs
- Antibiotic Resistance:
- Ampicillin
- Length:
- 6219 bp
- Type:
- Cloning vector
- Replication origin:
- ori
- Source/Author:
- Sedlmayer F, Hell D, Mueller M, Auslaender D, Fussenegger M.
pFS84-CMV-pfs vector Map
pFS84-CMV-pfs vector Sequence
LOCUS V006184 6219 bp DNA circular SYN 18-DEC-2018
DEFINITION Exported.
ACCESSION V006184
VERSION V006184
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
.
REFERENCE 1 (bases 1 to 6219)
AUTHORS Sedlmayer F, Hell D, Mueller M, Auslaender D, Fussenegger M.
TITLE Designer cells programming quorum-sensing interference with human
pathogens
JOURNAL Nat Commun (2018) In press
REFERENCE 2 (bases 1 to 6219)
AUTHORS Sedlmayer F, Hell D, Mueller M, Auslaender D, Fussenegger M.
TITLE Direct Submission
JOURNAL Submitted (21-AUG-2017) Department of Biosystems Science and
Engineering (D-BSSE), ETH Zurich, Mattenstrasse 26, Baseel 4058,
Switzerland
REFERENCE 3 (bases 1 to 6219)
TITLE Direct Submission
REFERENCE 4 (bases 1 to 6219)
AUTHORS .
TITLE Direct Submission
COMMENT ##Assembly-Data-START##
Sequencing Technology :: Sanger dideoxy sequencing
##Assembly-Data-END##
SGRef: number: 1; type: "Journal Article"; journalName: "Nat Commun
(2018) In press"
SGRef: number: 2; type: "Journal Article"; journalName: "Submitted
(21-AUG-2017) Department of Biosystems Science and Engineering
(D-BSSE), ETH Zurich, Mattenstrasse 26, Baseel 4058, Switzerland"
SGRef: number: 3; type: "Journal Article"
FEATURES Location/Qualifiers
source 1..6219
/mol_type="other DNA"
/organism="synthetic DNA construct"
CDS 13..708
/gene="mtnN"
/label="5'-methylthioadenosine/S-adenosylhomocysteine
nucleosidase"
/note="5'-methylthioadenosine/S-adenosylhomocysteine
nucleosidase from Escherichia coli O45:K1 (strain S88 /
ExPEC). Accession#: B7MBE2"
polyA_signal 755..979
/label="bGH poly(A) signal"
/note="bovine growth hormone polyadenylation signal"
rep_origin 1025..1453
/label="f1 ori"
/note="f1 bacteriophage origin of replication; arrow
indicates direction of (+) strand synthesis"
promoter 1467..1796
/label="SV40 promoter"
/note="SV40 enhancer and early promoter"
CDS 1845..2867
/label="HygR"
/note="aminoglycoside phosphotransferase from E. coli"
polyA_signal 3000..3133
/label="SV40 poly(A) signal"
/note="SV40 polyadenylation signal"
primer_bind complement(3170..3186)
/label="M13 rev"
/note="common sequencing primer, one of multiple similar
variants"
protein_bind complement(3194..3210)
/label="lac operator"
/note="The lac repressor binds to the lac operator to
inhibit transcription in E. coli. This inhibition can be
relieved by adding lactose or
isopropyl-beta-D-thiogalactopyranoside (IPTG)."
promoter complement(3218..3248)
/label="lac promoter"
/note="promoter for the E. coli lac operon"
protein_bind complement(3263..3284)
/label="CAP binding site"
/note="CAP binding activates transcription in the presence
of cAMP."
rep_origin complement(3572..4157)
/direction=LEFT
/label="ori"
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
CDS complement(4331..5188)
/label="AmpR"
/note="beta-lactamase"
promoter complement(5189..5293)
/label="AmpR promoter"
enhancer 5559..5938
/label="CMV enhancer"
/note="human cytomegalovirus immediate early enhancer"
promoter 5939..6142
/label="CMV promoter"
/note="human cytomegalovirus (CMV) immediate early
promoter"
promoter 6187..6205
/label="T7 promoter"
/note="promoter for bacteriophage T7 RNA polymerase"
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