Basic Vector Information
- Vector Name:
- pFNK-503-qscrsaL
- Antibiotic Resistance:
- Kanamycin
- Length:
- 3756 bp
- Type:
- Cloning vector
- Replication origin:
- p15A ori
- Source/Author:
- Karig D, Martini KM, Lu T, DeLateur NA, Goldenfeld N, Weiss R.
pFNK-503-qscrsaL vector Map
pFNK-503-qscrsaL vector Sequence
LOCUS V006208 3756 bp DNA circular SYN 18-DEC-2018
DEFINITION Exported.
ACCESSION V006208
VERSION V006208
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
.
REFERENCE 1 (bases 1 to 3756)
AUTHORS Karig D, Martini KM, Lu T, DeLateur NA, Goldenfeld N, Weiss R.
TITLE Stochastic Turing patterns in a synthetic bacterial population
JOURNAL Proc. Natl. Acad. Sci. U.S.A. (2018) In press
PUBMED 29891706
REFERENCE 2 (bases 1 to 3756)
AUTHORS Karig DK.
TITLE Direct Submission
JOURNAL Submitted (04-MAY-2018) Research and Development Department, Johns
Hopkins University Applied Physics Laboratory, 11100 Johns Hopkins
Rd, Laurel, MD 20723, USA
REFERENCE 3 (bases 1 to 3756)
TITLE Direct Submission
REFERENCE 4 (bases 1 to 3756)
AUTHORS .
TITLE Direct Submission
COMMENT ##Assembly-Data-START##
Sequencing Technology :: Sanger dideoxy sequencing
##Assembly-Data-END##
SGRef: number: 1; type: "Journal Article"; journalName: "Proc. Natl.
Acad. Sci. U.S.A. (2018) In press"
SGRef: number: 2; type: "Journal Article"; journalName: "Submitted
(04-MAY-2018) Research and Development Department, Johns Hopkins
University Applied Physics Laboratory, 11100 Johns Hopkins Rd,
Laurel, MD 20723, USA"
SGRef: number: 3; type: "Journal Article"
FEATURES Location/Qualifiers
source 1..3756
/mol_type="other DNA"
/organism="synthetic DNA construct"
CDS complement(70..786)
/gene="lasR"
/label="Transcriptional activator protein LasR"
/note="Transcriptional activator protein LasR from
Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP
104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1).
Accession#: P25084"
regulatory complement(796..804)
/label="RBS II"
/note="RBS II"
/regulatory_class="ribosome_binding_site"
regulatory complement(816..871)
/regulatory_class="promoter"
regulatory complement(825..830)
/regulatory_class="minus_10_signal"
regulatory complement(848..853)
/regulatory_class="minus_35_signal"
regulatory 907..963
/note="prokaryotic; qscrsaL"
/regulatory_class="promoter"
misc_feature 907..926
/label="las box - qscrsaL"
/note="las box - qscrsaL"
RBS 1001..1012
/note="strong bacterial ribosome binding site (Elowitz and
Leibler, 2000)"
regulatory 1001..1009
/label="RBSII"
/note="RBSII"
/regulatory_class="ribosome_binding_site"
CDS 1019..1732
/label="yeGFP"
/note="yeast-enhanced green fluorescent protein"
terminator 1823..1909
/label="rrnB T1 terminator"
/note="transcription terminator T1 from the E. coli rrnB
gene"
rep_origin complement(2078..2623)
/direction=LEFT
/label="p15A ori"
/note="Plasmids containing the medium-copy-number p15A
origin of replication can be propagated in E. coli cells
that contain a second plasmid with the ColE1 origin."
terminator complement(2737..2831)
/label="lambda t0 terminator"
/note="transcription terminator from phage lambda"
CDS complement(2865..3656)
/label="NeoR/KanR"
/note="aminoglycoside phosphotransferase"
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