Basic Vector Information
- Vector Name:
- pGPI-SceI-XErm
- Antibiotic Resistance:
- Trimethoprim
- Length:
- 6376 bp
- Type:
- Suicide vector
- Replication origin:
- R6K γ ori
- Source/Author:
- Yero D, Ferrer-Navarro M, Costenaro L, Planell R, Conchillo-Sole O, Sole M, Roca I, Gibert I, Daura X.
- Promoter:
- tac
pGPI-SceI-XErm vector Map
pGPI-SceI-XErm vector Sequence
LOCUS V005911 6376 bp DNA circular SYN 18-DEC-2018
DEFINITION Exported.
ACCESSION V005911
VERSION V005911
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
.
REFERENCE 1 (bases 1 to 6376)
AUTHORS Yero D, Ferrer-Navarro M, Costenaro L, Planell R, Conchillo-Sole O,
Sole M, Roca I, Gibert I, Daura X.
TITLE A transport system associated with the intrinsic antimicrobial
multiresistance in Pseudomonas aeruginosa
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 6376)
AUTHORS Yero D, Gibert I.
TITLE Direct Submission
JOURNAL Submitted (20-DEC-2016) Genetica Molecular Bacteriana, Institut de
Biotecnologia i de Biomedicina (IBB), Campus UAB, Bellaterra,
Barcelona 08191, Spain
REFERENCE 3 (bases 1 to 6376)
TITLE Direct Submission
REFERENCE 4 (bases 1 to 6376)
AUTHORS .
TITLE Direct Submission
COMMENT SGRef: number: 1; type: "Journal Article"; journalName:
"Unpublished"
SGRef: number: 2; type: "Journal Article"; journalName: "Submitted
(20-DEC-2016) Genetica Molecular Bacteriana, Institut de
Biotecnologia i de Biomedicina (IBB), Campus UAB, Bellaterra,
Barcelona 08191, Spain"
SGRef: number: 3; type: "Journal Article"
FEATURES Location/Qualifiers
source 1..6376
/mol_type="other DNA"
/organism="synthetic DNA construct"
oriT 625..734
/label="oriT"
/note="incP origin of transfer"
CDS 767..1135
/label="traJ"
/note="oriT-recognizing protein"
CDS complement(1101..1526)
/codon_start=1
/gene="traI"
/product="TraI"
/label="traI"
/protein_id="ATW75324.1"
/translation="MNVQVVGVVMHGTDALMLGEAKPSADAVLNRAQRLRVGLLSRAEA
NQQVIGLVGLGTGVAVLGRHHLGHDSGQGVCLAVRDAHVTQALGLALLVGDVLHQLREV
ALLDGAHGDVLGNHAHPPAVLAAKKVMALPSGGPRPS"
gene complement(1101..1526)
/gene="traI"
/label="traI"
rep_origin 1756..2144
/label="R6K gamma ori"
/note="gamma replication origin from E. coli plasmid R6K;
requires the R6K initiator protein pi for replication"
misc_feature 2149..2177
/label="multiple cloning site 1"
/note="multiple cloning site 1"
promoter 2193..2221
/label="tac promoter"
/note="strong E. coli promoter; hybrid between the trp and
lac UV5 promoters"
CDS 2253..3173
/gene="xylE"
/label="Metapyrocatechase"
/note="Metapyrocatechase from Pseudomonas putida.
Accession#: P06622"
misc_feature 3182..3215
/label="multiple cloning site 2"
/note="multiple cloning site 2"
CDS 3939..4172
/label="TpR"
/note="E. coli plasmid-associated dihydrofolate reductase"
misc_feature 4178..4195
/label="I-SceI recognition site"
/note="I-SceI recognition site"
CDS 4582..5316
/gene="ermBP"
/label="rRNA adenine N-6-methyltransferase"
/note="rRNA adenine N-6-methyltransferase from Enterococcus
faecalis. Accession#: P0A4D5"
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