Basic Vector Information
- Vector Name:
- pCotZ-CL-thr
- Antibiotic Resistance:
- Ampicillin
- Length:
- 7655 bp
- Type:
- Cloning vector
- Replication origin:
- ori
- Source/Author:
- Iwanicki A, Hinc K, Stasilojc M, Piatek I, Grela A, Lega T, Obuchowski M.
pCotZ-CL-thr vector Map
pCotZ-CL-thr vector Sequence
LOCUS V008272 7655 bp DNA circular SYN 17-DEC-2018
DEFINITION Exported.
ACCESSION V008272
VERSION V008272
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
.
REFERENCE 1 (bases 1 to 7655)
AUTHORS Iwanicki A, Hinc K, Stasilojc M, Piatek I, Grela A, Lega T,
Obuchowski M.
TITLE Vector system for spore sufrace display
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 7655)
AUTHORS Iwanicki A, Hinc K, Stasilojc M, Piatek I, Grela A, Lega T,
Obuchowski M.
TITLE Direct Submission
JOURNAL Submitted (25-NOV-2013) Laboratory of Molecular Bacteriology,
Medical University of Gdansk, Debinki 1, Gdansk 80-211, Poland
REFERENCE 3 (bases 1 to 7655)
TITLE Direct Submission
REFERENCE 4 (bases 1 to 7655)
AUTHORS .
TITLE Direct Submission
COMMENT ##Assembly-Data-START##
Assembly Method :: Vector NTI Advanced v. 10
Sequencing Technology :: Sanger dideoxy sequencing
##Assembly-Data-END##
SGRef: number: 1; type: "Journal Article"; journalName:
"Unpublished"
SGRef: number: 2; type: "Journal Article"; journalName: "Submitted
(25-NOV-2013) Laboratory of Molecular Bacteriology, Medical
University of Gdansk, Debinki 1, Gdansk 80-211, Poland"
SGRef: number: 3; type: "Journal Article"
FEATURES Location/Qualifiers
source 1..7655
/mol_type="other DNA"
/organism="synthetic DNA construct"
CDS 247..879
/codon_start=1
/gene="thrC"
/product="ThrC"
/label="thrC"
/note="N terminal part of thrC"
/protein_id="AHG54660.1"
/translation="MWKGLIHQYKEFLPVTDQTPALTLHEGNTPLIHLPKLSEQLGIEL
HVKTEGVNPTGSFKDRGMVMAVAKAKEEGNDTIMCASTGNTSAAAAAYAARANMKCIVI
IPNGKIAFGKLAQAVMYGAEIIAIDGNFDDALKIVRSICEKSPIALVNSVNPYRIEGQK
TAAFEIVHNGFPYAKYGQTWPARLLLFLTPDQLVMVATGAQLELRRY"
gene 247..879
/gene="thrC"
/label="thrC"
gene complement(1124..2316)
/gene="cotZ"
/label="cotZ"
misc_feature complement(1124..1149)
/gene="cotZ"
/label="multiple cloning site"
/note="multiple cloning site"
CDS complement(1135..1626)
/codon_start=1
/gene="cotZ"
/product="CotZ"
/label="cotZ"
/note="spore coat protein"
/protein_id="AHG54656.1"
/translation="MSQKTSSCVREAVENIEDLQNAVEEDCPTGCHSKLLSVSHSLGDT
VPFAIFTSKSTPLVAFGNVGELDNGPCFNTVFFRVERVHGSCATLSLLIAFDEHKHILD
FTDKDTVCEVFRLEKTNYCIEVDLDCFCAINCLNPRLINRTHHHGGGEAAAKGGGGSGR
"
regulatory complement(1633..1638)
/gene="cotZ"
/regulatory_class="ribosome_binding_site"
CDS complement(1754..2293)
/codon_start=1
/gene="cotY"
/product="CotY"
/label="cotY"
/note="spore coat protein"
/protein_id="AHG54655.1"
/translation="MLLRTKVKYPIKKELKSMSCGKTHGRHENCVCDAVEKILAEQEAV
EEQCPTGCYTNLLNPTIAGKDTIPFLVFDKKGGLFSTFGNVGGFVDDMQCFESIFFRVE
KLCDCCATLSILRPVDVKGDTLSVCHPCDPDFFGLEKTDFCIEVDLGCFCAIQCLSPEL
VDRTSPHKDKKHHHNG"
gene complement(1754..2293)
/gene="cotY"
/label="cotY"
regulatory complement(2288..2316)
/gene="cotZ"
/regulatory_class="promoter"
CDS 2536..3288
/codon_start=1
/gene="trpC"
/product="TrpC"
/label="trpC"
/protein_id="AHG54661.1"
/translation="MLEKIIKQKKEEVKTLVLPVEQPFEKRSFKEAPASPNRFIGLIAE
VKKASPSKGLIKEDFVPVQIAKDYEAAKADAISVLTDTPFFQGENSYLSDVKRAVSIPV
LRKDFIIDSLQVEESRRIGADAILLIGEVLDPLHLHELYLEAGEKGMDVLVEVHDASTL
EQILKVFTPDILGVNNRNLKTFETSVKQTEQIASLVPKESLLVSESGIGSLEHLTFVNE
HGARAVLIGESLMRQTSQRKAIHALFRE"
gene 2536..3288
/gene="trpC"
/label="trpC"
CDS 3718..4146
/codon_start=1
/gene="thrC"
/product="ThrC"
/label="thrC"
/note="C-terminal part of thrC"
/protein_id="AHG54659.1"
/translation="MRGFEAEGAAAIVRNEVIENPETIATAIRIGNPASWDKAVKAAEE
SNGKIDEVTDDEILHAYQLIARVEGVFAEPGSCASIAGVLKQVKSGEIPKGSKVVAVLT
GNGLKDPNTAVDISEIKPVTLPTDEDSILEYVKGAARV"
gene 3718..4146
/gene="thrC"
/label="thrC"
CDS 4143..4553
/codon_start=1
/gene="thrB"
/product="ThrB"
/label="thrB"
/note="N terminal part of thrB"
/protein_id="AHG54658.1"
/translation="MNEADMLFSVTVPGSTANLGPGFDSVGMALSRYLKLTVFESDKWS
FEAETETVAGINSSSFNFLTSSCIGTISRSSNPSSFTSIRFNQHSKNLTGHRQFFEQCA
NYQLFLQFIQGTGEPACNPSCSIMRNDPHPVS"
gene 4143..4553
/gene="thrB"
/label="thrB"
CDS 4797..5576
/gene="ant1"
/label="Spectinomycin 9-adenylyltransferase"
/note="Spectinomycin 9-adenylyltransferase from
Staphylococcus aureus (strain N315). Accession#: P0A0D1"
rep_origin complement(5826..6414)
/direction=LEFT
/label="ori"
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
CDS complement(6588..7445)
/label="AmpR"
/note="beta-lactamase"
promoter complement(7446..7550)
/label="AmpR promoter"
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