Basic Vector Information
- Vector Name:
- pCotZ-C-thr
- Antibiotic Resistance:
- Ampicillin
- Length:
- 7578 bp
- Type:
- Cloning vector
- Replication origin:
- ori
- Source/Author:
- Iwanicki A, Hinc K, Stasilojc M, Piatek I, Grela A, Lega T, Obuchowski M.
pCotZ-C-thr vector Map
pCotZ-C-thr vector Sequence
LOCUS V008273 7578 bp DNA circular SYN 17-DEC-2018
DEFINITION Exported.
ACCESSION V008273
VERSION V008273
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
.
REFERENCE 1 (bases 1 to 7578)
AUTHORS Iwanicki A, Hinc K, Stasilojc M, Piatek I, Grela A, Lega T,
Obuchowski M.
TITLE Vector system for spore sufrace display
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 7578)
AUTHORS Iwanicki A, Hinc K, Stasilojc M, Piatek I, Grela A, Lega T,
Obuchowski M.
TITLE Direct Submission
JOURNAL Submitted (25-NOV-2013) Laboratory of Molecular Bacteriology,
Medical University of Gdansk, Debinki 1, Gdansk 80-211, Poland
REFERENCE 3 (bases 1 to 7578)
TITLE Direct Submission
REFERENCE 4 (bases 1 to 7578)
AUTHORS .
TITLE Direct Submission
COMMENT ##Assembly-Data-START##
Assembly Method :: Vector NTI Advanced v. 10
Sequencing Technology :: Sanger dideoxy sequencing
##Assembly-Data-END##
SGRef: number: 1; type: "Journal Article"; journalName:
"Unpublished"
SGRef: number: 2; type: "Journal Article"; journalName: "Submitted
(25-NOV-2013) Laboratory of Molecular Bacteriology, Medical
University of Gdansk, Debinki 1, Gdansk 80-211, Poland"
SGRef: number: 3; type: "Journal Article"
FEATURES Location/Qualifiers
source 1..7578
/mol_type="other DNA"
/organism="synthetic DNA construct"
CDS 247..879
/codon_start=1
/gene="thrC"
/product="ThrC"
/label="thrC"
/note="N terminal part of thrC"
/protein_id="AHG54652.1"
/translation="MWKGLIHQYKEFLPVTDQTPALTLHEGNTPLIHLPKLSEQLGIEL
HVKTEGVNPTGSFKDRGMVMAVAKAKEEGNDTIMCASTGNTSAAAAAYAARANMKCIVI
IPNGKIAFGKLAQAVMYGAEIIAIDGNFDDALKIVRSICEKSPIALVNSVNPYRIEGQK
TAAFEIVHNGFPYAKYGQTWPARLLLFLTPDQLVMVATGAQLELRRY"
gene 247..879
/gene="thrC"
/label="thrC"
gene complement(1135..2283)
/gene="cotZ"
/label="cotZ"
CDS complement(1135..1593)
/codon_start=1
/gene="cotZ"
/product="CotZ"
/label="cotZ"
/note="spore coat protein"
/protein_id="AHG54649.1"
/translation="MSQKTSSCVREAVENIEDLQNAVEEDCPTGCHSKLLSVSHSLGDT
VPFAIFTSKSTPLVAFGNVGELDNGPCFNTVFFRVERVHGSCATLSLLIAFDEHKHILD
FTDKDTVCEVFRLEKTNYCIEVDLDCFCAINCLNPRLINRTHHHGSGR"
regulatory complement(1600..1605)
/gene="cotZ"
/regulatory_class="ribosome_binding_site"
CDS complement(1721..2260)
/codon_start=1
/gene="cotY"
/product="CotY"
/label="cotY"
/note="spore coat protein"
/protein_id="AHG54648.1"
/translation="MLLRTKVKYPIKKELKSMSCGKTHGRHENCVCDAVEKILAEQEAV
EEQCPTGCYTNLLNPTIAGKDTIPFLVFDKKGGLFSTFGNVGGFVDDMQCFESIFFRVE
KLCDCCATLSILRPVDVKGDTLSVCHPCDPDFFGLEKTDFCIEVDLGCFCAIQCLSPEL
VDRTSPHKDKKHHHNG"
gene complement(1721..2260)
/gene="cotY"
/label="cotY"
regulatory complement(2255..2263)
/gene="cotZ"
/regulatory_class="minus_10_signal"
regulatory complement(2280..2283)
/gene="cotZ"
/regulatory_class="minus_35_signal"
CDS 2459..3211
/codon_start=1
/gene="trpC"
/product="TrpC"
/label="trpC"
/protein_id="AHG54653.1"
/translation="MLEKIIKQKKEEVKTLVLPVEQPFEKRSFKEAPASPNRFIGLIAE
VKKASPSKGLIKEDFVPVQIAKDYEAAKADAISVLTDTPFFQGENSYLSDVKRAVSIPV
LRKDFIIDSLQVEESRRIGADAILLIGEVLDPLHLHELYLEAGEKGMDVLVEVHDASTL
EQILKVFTPDILGVNNRNLKTFETSVKQTEQIASLVPKESLLVSESGIGSLEHLTFVNE
HGARAVLIGESLMRQTSQRKAIHALFRE"
gene 2459..3211
/gene="trpC"
/label="trpC"
CDS 3641..4069
/codon_start=1
/gene="thrC"
/product="ThrC"
/label="thrC"
/note="C-terminal part of thrC"
/protein_id="AHG54651.1"
/translation="MRGFEAEGAAAIVRNEVIENPETIATAIRIGNPASWDKAVKAAEE
SNGKIDEVTDDEILHAYQLIARVEGVFAEPGSCASIAGVLKQVKSGEIPKGSKVVAVLT
GNGLKDPNTAVDISEIKPVTLPTDEDSILEYVKGAARV"
gene 3641..4069
/gene="thrC"
/label="thrC"
CDS 4066..4476
/codon_start=1
/gene="thrB"
/product="ThrB"
/label="thrB"
/note="N terminal part of thrB"
/protein_id="AHG54650.1"
/translation="MNEADMLFSVTVPGSTANLGPGFDSVGMALSRYLKLTVFESDKWS
FEAETETVAGINSSSFNFLTSSCIGTISRSSNPSSFTSIRFNQHSKNLTGHRQFFEQCA
NYQLFLQFIQGTGEPACNPSCSIMRNDPHPVS"
gene 4066..4476
/gene="thrB"
/label="thrB"
CDS 4720..5499
/gene="ant1"
/label="Spectinomycin 9-adenylyltransferase"
/note="Spectinomycin 9-adenylyltransferase from
Staphylococcus aureus (strain N315). Accession#: P0A0D1"
rep_origin complement(5749..6337)
/direction=LEFT
/label="ori"
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
CDS complement(6511..7368)
/label="AmpR"
/note="beta-lactamase"
promoter complement(7369..7473)
/label="AmpR promoter"
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