Basic Vector Information
- Vector Name:
- pCotC-N
- Antibiotic Resistance:
- Ampicillin
- Length:
- 5465 bp
- Type:
- Cloning vector
- Replication origin:
- ori
- Source/Author:
- Iwanicki A, Hinc K, Stasilojc M, Piatek I, Grela A, Lega T, Obuchowski M.
pCotC-N vector Map
pCotC-N vector Sequence
LOCUS V008279 5465 bp DNA circular SYN 17-DEC-2018
DEFINITION Exported.
ACCESSION V008279
VERSION V008279
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
.
REFERENCE 1 (bases 1 to 5465)
AUTHORS Iwanicki A, Hinc K, Stasilojc M, Piatek I, Grela A, Lega T,
Obuchowski M.
TITLE Vector system for spore sufrace display
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 5465)
AUTHORS Iwanicki A, Hinc K, Stasilojc M, Piatek I, Grela A, Lega T,
Obuchowski M.
TITLE Direct Submission
JOURNAL Submitted (24-OCT-2013) Laboratory of Molecular Bacteriology,
Medical University of Gdansk, Debinki 1, Gdansk 80-211, Poland
REFERENCE 3 (bases 1 to 5465)
TITLE Direct Submission
REFERENCE 4 (bases 1 to 5465)
AUTHORS .
TITLE Direct Submission
COMMENT ##Assembly-Data-START##
Assembly Method :: Vectro NTI Advanced v. 10
Sequencing Technology :: Sanger dideoxy sequencing
##Assembly-Data-END##
SGRef: number: 1; type: "Journal Article"; journalName:
"Unpublished"
SGRef: number: 2; type: "Journal Article"; journalName: "Submitted
(24-OCT-2013) Laboratory of Molecular Bacteriology, Medical
University of Gdansk, Debinki 1, Gdansk 80-211, Poland"
SGRef: number: 3; type: "Journal Article"
FEATURES Location/Qualifiers
source 1..5465
/mol_type="other DNA"
/organism="synthetic DNA construct"
primer_bind 379..395
/label="M13 fwd"
/note="common sequencing primer, one of multiple similar
variants"
misc_recomb complement(401..873)
/label="C-terminal part of lacA"
/note="C-terminal part of lacA"
gene 986..1268
/gene="cotC"
/label="cotC"
regulatory 986..1032
/gene="cotC"
/regulatory_class="promoter"
regulatory 1040..1045
/gene="cotC"
/regulatory_class="ribosome_binding_site"
CDS 1053..1268
/codon_start=1
/gene="cotC"
/product="CotC"
/label="cotC"
/note="spore coat protein"
/protein_id="AHG54607.1"
/translation="MGTRGSGYYKKYKEEYYTVKKTYYKKYYEYDKKDYDCDYDKKYDD
YDKKYYDHDKKDYDYVVEYKKHKKHY"
misc_feature 1056..1070
/gene="cotC"
/label="multiple cloning site"
/note="multiple cloning site"
regulatory 1333..1518
/gene="hisD"
/label="promoter region"
/note="promoter region"
/regulatory_class="promoter"
CDS 1545..2825
/gene="hisD"
/label="Histidinol dehydrogenase"
/note="Histidinol dehydrogenase from Bacillus subtilis
(strain 168). Accession#: O34651"
misc_recomb complement(2847..3225)
/label="N terminal part of lacA"
/note="N terminal part of lacA"
primer_bind complement(3244..3260)
/label="M13 rev"
/note="common sequencing primer, one of multiple similar
variants"
protein_bind complement(3268..3284)
/label="lac operator"
/note="The lac repressor binds to the lac operator to
inhibit transcription in E. coli. This inhibition can be
relieved by adding lactose or
isopropyl-beta-D-thiogalactopyranoside (IPTG)."
promoter complement(3292..3322)
/label="lac promoter"
/note="promoter for the E. coli lac operon"
protein_bind complement(3337..3358)
/label="CAP binding site"
/note="CAP binding activates transcription in the presence
of cAMP."
rep_origin complement(3646..4234)
/direction=LEFT
/label="ori"
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
CDS complement(4408..5265)
/label="AmpR"
/note="beta-lactamase"
promoter complement(5266..5370)
/label="AmpR promoter"
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