Basic Vector Information
- Vector Name:
- pBGEN02-ALSdm
- Length:
- 10549 bp
- Type:
- Cloning vector
- Replication origin:
- ori
- Host:
- Plants
- Source/Author:
- Kanoria S, Burma PK.
- Promoter:
- minimal CaMV 35S
pBGEN02-ALSdm vector Map
pBGEN02-ALSdm vector Sequence
LOCUS V009209 10549 bp DNA circular SYN 17-DEC-2018
DEFINITION Exported.
ACCESSION V009209
VERSION V009209
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
.
REFERENCE 1 (bases 1 to 10549)
AUTHORS Kanoria S, Burma PK.
TITLE Cloning vectors for achieving high levels of transgene expression in
plants
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 10549)
AUTHORS Kanoria S, Burma PK.
TITLE Direct Submission
JOURNAL Submitted (13-DEC-2011) Genetics, University of Delhi, South Campus,
Benito Juarez Road, New Delhi, New Delhi 110021, India
REFERENCE 3 (bases 1 to 10549)
TITLE Direct Submission
REFERENCE 4 (bases 1 to 10549)
AUTHORS .
TITLE Direct Submission
COMMENT SGRef: number: 1; type: "Journal Article"; journalName:
"Unpublished"
SGRef: number: 2; type: "Journal Article"; journalName: "Submitted
(13-DEC-2011) Genetics, University of Delhi, South Campus, Benito
Juarez Road, New Delhi, New Delhi 110021, India"
SGRef: number: 3; type: "Journal Article"
FEATURES Location/Qualifiers
source 1..10549
/mol_type="other DNA"
/organism="synthetic DNA construct"
CDS 1187..1813
/label="pVS1 StaA"
/note="stability protein from the Pseudomonas plasmid pVS1
(Heeb et al., 2000)"
CDS 2250..3314
/label="pVS1 RepA"
/note="replication protein from the Pseudomonas plasmid
pVS1 (Heeb et al., 2000)"
rep_origin 3383..3577
/label="pVS1 oriV"
/note="origin of replication for the Pseudomonas plasmid
pVS1 (Heeb et al., 2000)"
misc_feature 3921..4063
/label="bom"
/note="basis of mobility region from pBR322"
rep_origin complement(4249..4837)
/direction=LEFT
/label="ori"
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
misc_feature 5814..5838
/label="LB T-DNA repeat"
/note="left border repeat from nopaline C58 T-DNA"
protein_bind 6152..6185
/label="loxP"
/note="Cre-mediated recombination occurs in the 8-bp core
sequence (ATGTATGC) (Shaw et al., 2021)."
promoter 6595..6641
/label="minimal CaMV 35S promoter"
/note="minimal 35S promoter from cauliflower mosaic virus"
CDS 6657..8666
/gene="ALS"
/label="Acetolactate synthase, chloroplastic"
/note="Acetolactate synthase, chloroplastic from
Arabidopsis thaliana. Accession#: P17597"
regulatory 8686..8902
/label="35S"
/note="35S"
/regulatory_class="polyA_signal_sequence"
misc_feature 8919..8952
/label="loxP"
/note="loxP"
protein_bind complement(8919..8952)
/label="loxP"
/bound_moiety="Cre recombinase"
/note="Cre-mediated recombination occurs in the 8-bp core
sequence (GCATACAT)."
misc_feature 9206..9471
/label="multiple cloning site 2 (outside loxP)"
/note="multiple cloning site 2 (outside loxP)"
promoter 9544..9890
/label="CaMV 35S promoter"
/note="strong constitutive promoter from cauliflower mosaic
virus"
misc_feature 9921..9941
/note="multiple cloning site 1 (between 35S promoter and
polyA)"
misc_feature 10143..10240
/note="multiple cloning site 3 (for cloning another
transgene)"
misc_feature 10413..10437
/label="RB T-DNA repeat"
/note="right border repeat from nopaline C58 T-DNA"
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