Basic Vector Information
- Vector Name:
- pC1300intB
- Antibiotic Resistance:
- Kanamycin
- Length:
- 9170 bp
- Type:
- Cloning vector
- Replication origin:
- ori
- Host:
- Plants
- Source/Author:
- Ouwerkerk PBF.
- Promoter:
- CaMV 35S (enhanced)
pC1300intB vector Map
pC1300intB vector Sequence
LOCUS 40924_7906 9170 bp DNA circular SYN 17-DEC-2018
DEFINITION Cloning vector pC1300intB, complete sequence.
ACCESSION .
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 9170)
AUTHORS Ouwerkerk PBF.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2000) Dept. of Molecular Cell Biology, Institute
for Molecular Plant Sciences, Wassenaarseweg 64, Leiden 2333 AL,
Netherlands
REFERENCE 2 (bases 1 to 9170)
TITLE Direct Submission
REFERENCE 3 (bases 1 to 9170)
AUTHORS .
TITLE Direct Submission
COMMENT SGRef: number: 1; type: "Journal Article"; journalName: "Submitted
(11-AUG-2000) Dept. of Molecular Cell Biology, Institute for
Molecular Plant Sciences, Wassenaarseweg 64, Leiden 2333 AL,
Netherlands"
COMMENT SGRef: number: 2; type: "Journal Article"
FEATURES Location/Qualifiers
source 1..9170
/mol_type="other DNA"
/organism="synthetic DNA construct"
misc_feature 1..57
/label=MCS
/note="pUC18/19 multiple cloning site"
primer_bind complement(61..77)
/label=M13 fwd
/note="common sequencing primer, one of multiple similar
variants"
misc_feature 280..304
/label=RB T-DNA repeat
/note="right border repeat from nopaline C58 T-DNA"
CDS 1604..2230
/label=pVS1 StaA
/note="stability protein from the Pseudomonas plasmid pVS1
(Heeb et al., 2000)"
CDS 2667..3731
/label=pVS1 RepA
/note="replication protein from the Pseudomonas plasmid
pVS1 (Heeb et al., 2000)"
rep_origin 3800..3994
/label=pVS1 oriV
/note="origin of replication for the Pseudomonas plasmid
pVS1 (Heeb et al., 2000)"
misc_feature 4338..4478
/label=bom
/note="basis of mobility region from pBR322"
rep_origin complement(4664..5252)
/direction=LEFT
/label=ori
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
CDS complement(5342..6133)
/label=KanR
/note="aminoglycoside phosphotransferase"
misc_feature 6558..6582
/label=LB T-DNA repeat
/note="left border repeat from nopaline C58 T-DNA"
polyA_signal complement(6660..6834)
/label=CaMV poly(A) signal
/note="cauliflower mosaic virus polyadenylation signal"
exon complement(6885..7577)
/gene="hptII"
/number=2
intron complement(7572..7761)
/label=cat1 intron
/note="castor bean catalase intron, modified"
exon complement(7768..8100)
/gene="hptII"
/number=1
promoter complement(8179..8856)
/label=CaMV 35S promoter (enhanced)
/note="cauliflower mosaic virus 35S promoter with a
duplicated enhancer region"
protein_bind 9047..9068
/label=CAP binding site
/note="CAP binding activates transcription in the presence
of cAMP."
promoter 9083..9113
/label=lac promoter
/note="promoter for the E. coli lac operon"
protein_bind 9121..9137
/label=lac operator
/note="The lac repressor binds to the lac operator to
inhibit transcription in E. coli. This inhibition can be
relieved by adding lactose or
isopropyl-beta-D-thiogalactopyranoside (IPTG)."
primer_bind 9145..9161
/label=M13 rev
/note="common sequencing primer, one of multiple similar
variants"
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