Basic Vector Information
- Vector Name:
- pC1300intB-35SnosEX
- Antibiotic Resistance:
- Kanamycin
- Length:
- 9937 bp
- Type:
- Cloning vector
- Replication origin:
- ori
- Host:
- Plants
- Source/Author:
- Ouwerkerk PBF., Meijer AH.
- Promoter:
- CaMV 35S (enhanced)
pC1300intB-35SnosEX vector Map
pC1300intB-35SnosEX vector Sequence
LOCUS 40924_7901 9937 bp DNA circular SYN 17-DEC-2018
DEFINITION Cloning vector pC1300intB-35SnosEX, complete sequence.
ACCESSION .
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 9937)
AUTHORS Ouwerkerk PBF., Meijer AH.
TITLE Binary expression vector for use in plants
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 9937)
AUTHORS Ouwerkerk PBF., Meijer AH.
TITLE Direct Submission
JOURNAL Submitted (26-FEB-2004) Molecular Cell Biology, Institute of
Biology, Leiden University, Wassenaarseweg 64, Leiden 2333 AL, The
Netherlands
REFERENCE 3 (bases 1 to 9937)
TITLE Direct Submission
REFERENCE 4 (bases 1 to 9937)
AUTHORS .
TITLE Direct Submission
COMMENT SGRef: number: 1; type: "Journal Article"; journalName:
"Unpublished"
COMMENT SGRef: number: 2; type: "Journal Article"; journalName: "Submitted
(26-FEB-2004) Molecular Cell Biology, Institute of Biology, Leiden
University, Wassenaarseweg 64, Leiden 2333 AL, The Netherlands"
COMMENT SGRef: number: 3; type: "Journal Article"
FEATURES Location/Qualifiers
source 1..9937
/mol_type="other DNA"
/organism="synthetic DNA construct"
terminator complement(52..304)
/label=NOS terminator
/note="nopaline synthase terminator and poly(A) signal"
misc_feature complement(322..347)
/note="multiple cloning site; SpeI, XhoI, EcoRI, SalI are
unique"
misc_feature complement(349..404)
/label=TMV Omega
/note="translational enhancer from the tobacco mosaic virus
5'-leader sequence (Gallie et al., 1988)"
promoter complement(424..768)
/label=CaMV 35S promoter
/note="strong constitutive promoter from cauliflower mosaic
virus"
primer_bind complement(828..844)
/label=M13 fwd
/note="common sequencing primer, one of multiple similar
variants"
misc_feature 1047..1071
/label=RB T-DNA repeat
/note="right border repeat from nopaline C58 T-DNA"
CDS 2371..2997
/label=pVS1 StaA
/note="stability protein from the Pseudomonas plasmid pVS1
(Heeb et al., 2000)"
CDS 3434..4498
/label=pVS1 RepA
/note="replication protein from the Pseudomonas plasmid
pVS1 (Heeb et al., 2000)"
rep_origin 4567..4761
/label=pVS1 oriV
/note="origin of replication for the Pseudomonas plasmid
pVS1 (Heeb et al., 2000)"
misc_feature 5105..5245
/label=bom
/note="basis of mobility region from pBR322"
rep_origin complement(5431..6019)
/direction=LEFT
/label=ori
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
CDS complement(6109..6900)
/label=KanR
/note="aminoglycoside phosphotransferase"
misc_feature 7325..7349
/label=LB T-DNA repeat
/note="left border repeat from nopaline C58 T-DNA"
polyA_signal complement(7427..7601)
/label=CaMV poly(A) signal
/note="cauliflower mosaic virus polyadenylation signal"
exon complement(7652..8338)
/gene="hptII"
/number=2
intron complement(8339..8528)
/label=cat1 intron
/note="castor bean catalase intron, modified"
exon complement(8529..8867)
/gene="hptII"
/number=1
promoter complement(8946..9623)
/label=CaMV 35S promoter (enhanced)
/note="cauliflower mosaic virus 35S promoter with a
duplicated enhancer region"
protein_bind 9814..9835
/label=CAP binding site
/note="CAP binding activates transcription in the presence
of cAMP."
promoter 9850..9880
/label=lac promoter
/note="promoter for the E. coli lac operon"
protein_bind 9888..9904
/label=lac operator
/bound_moiety="lac repressor encoded by lacI"
/note="The lac repressor binds to the lac operator to
inhibit transcription in E. coli. This inhibition can be
relieved by adding lactose or
isopropyl-beta-D-thiogalactopyranoside (IPTG)."
primer_bind 9912..9928
/label=M13 rev
/note="common sequencing primer, one of multiple similar
variants"
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