Basic Vector Information
- Vector Name:
- pC-N
- Antibiotic Resistance:
- Ampicillin
- Length:
- 6225 bp
- Type:
- Reverse genetics vector
- Replication origin:
- ori
- Source/Author:
- Bergeron E, Zivcec M, Chakrabarti AK, Nichol ST, Albarino CG, Spiropoulou CF.
- Promoter:
- chicken β-actin
pC-N vector Map
pC-N vector Sequence
LOCUS V008969 6225 bp DNA circular SYN 17-DEC-2018
DEFINITION Exported.
ACCESSION V008969
VERSION V008969
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
.
REFERENCE 1 (bases 1 to 6225)
AUTHORS Bergeron E, Zivcec M, Chakrabarti AK, Nichol ST, Albarino CG,
Spiropoulou CF.
TITLE Recovery of Recombinant Crimean Congo Hemorrhagic Fever Virus
Reveals a Function for Non-structural Glycoproteins Cleavage by
Furin
JOURNAL PLoS Pathog. 11 (5), E1004879 (2015)
PUBMED 25933376
REFERENCE 2 (bases 1 to 6225)
AUTHORS Bergeron E, Chakrabarti AK, Nichol ST, Albarino CG, Spiropoulou CF.
TITLE Direct Submission
JOURNAL Submitted (31-MAR-2014) Viral Special Pathogens Branch, Centers for
Disease Control and Prevention, 1600 Clifton Rd NE, Atlanta, GA
30333, USA
REFERENCE 3 (bases 1 to 6225)
TITLE Direct Submission
REFERENCE 4 (bases 1 to 6225)
AUTHORS .
TITLE Direct Submission
COMMENT SGRef: number: 1; type: "Journal Article"; journalName: "PLoS
Pathog."; date: "2015"; volume: "11"; issue: "5"; pages: "E1004879"
SGRef: number: 2; type: "Journal Article"; journalName: "Submitted
(31-MAR-2014) Viral Special Pathogens Branch, Centers for Disease
Control and Prevention, 1600 Clifton Rd NE, Atlanta, GA 30333, USA"
SGRef: number: 3; type: "Journal Article"
FEATURES Location/Qualifiers
source 1..6225
/mol_type="other DNA"
/organism="synthetic DNA construct"
enhancer 4..383
/label="CMV enhancer"
/note="human cytomegalovirus immediate early enhancer"
regulatory 140..384
/label="CMV IE"
/note="CMV IE"
/regulatory_class="enhancer"
regulatory 366..663
/label="chicken beta actin promoter"
/note="chicken beta actin promoter"
/regulatory_class="promoter"
promoter 386..661
/label="chicken beta-actin promoter"
intron 662..1670
/label="chimeric intron"
/note="chimera between introns from chicken beta-actin and
rabbit beta-globin"
CDS 1751..3196
/gene="N"
/label="Nucleoprotein"
/note="Nucleoprotein from Crimean-Congo hemorrhagic fever
virus (strain Nigeria/IbAr10200/1970). Accession#: P89522"
polyA_signal 3314..3369
/label="beta-globin poly(A) signal"
/note="rabbit beta-globin polyadenylation signal (Gil and
Proudfoot, 1987)"
primer_bind complement(3728..3744)
/label="M13 rev"
/note="common sequencing primer, one of multiple similar
variants"
protein_bind complement(3752..3768)
/label="lac operator"
/note="The lac repressor binds to the lac operator to
inhibit transcription in E. coli. This inhibition can be
relieved by adding lactose or
isopropyl-beta-D-thiogalactopyranoside (IPTG)."
promoter complement(3776..3806)
/label="lac promoter"
/note="promoter for the E. coli lac operon"
protein_bind complement(3821..3842)
/label="CAP binding site"
/note="CAP binding activates transcription in the presence
of cAMP."
promoter 3900..4096
/label="SV40 promoter"
/note="SV40 early promoter"
polyA_signal 4102..4236
/label="SV40 poly(A) signal"
/note="SV40 polyadenylation signal"
rep_origin complement(4475..5063)
/direction=LEFT
/label="ori"
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
CDS complement(5237..6094)
/label="AmpR"
/note="beta-lactamase"
promoter complement(6095..6199)
/label="AmpR promoter"
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