Basic Vector Information
- Vector Name:
- pUCAG.nkx2.5
- Antibiotic Resistance:
- Ampicillin
- Length:
- 6175 bp
- Type:
- Shuttle vector
- Replication origin:
- ori
- Source/Author:
- van Tuyn J, Pijnappels DA, de Vries AA, de Vries I, van der Velde-van Dijke I, Knaan-Shanzer S, van der Laarse A, Schalij MJ, Atsma DE.
- Promoter:
- chicken β-actin
pUCAG.nkx2.5 vector Map
pUCAG.nkx2.5 vector Sequence
LOCUS V002385 6175 bp DNA circular SYN 18-DEC-2018
DEFINITION Exported.
ACCESSION V002385
VERSION V002385
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
.
REFERENCE 1 (bases 1 to 6175)
AUTHORS van Tuyn J, Pijnappels DA, de Vries AA, de Vries I, van der
Velde-van Dijke I, Knaan-Shanzer S, van der Laarse A, Schalij MJ,
Atsma DE.
TITLE Fibroblasts from human postmyocardial infarction scars acquire
properties of cardiomyocytes after transduction with a recombinant
myocardin gene
JOURNAL FASEB J. 21 (12), 3369-3379 (2007)
PUBMED 17579192
REFERENCE 2 (bases 1 to 6175)
AUTHORS van Tuyn J.
TITLE Direct Submission
JOURNAL Submitted (13-DEC-2006) MCB, LUMC, Einthovenweg 20, Leiden, ZH 2300
RC, Netherlands
REFERENCE 3 (bases 1 to 6175)
TITLE Direct Submission
REFERENCE 4 (bases 1 to 6175)
AUTHORS .
TITLE Direct Submission
COMMENT SGRef: number: 1; type: "Journal Article"; journalName: "FASEB J.";
date: "2007"; volume: "21"; issue: "12"; pages: "3369-3379"
SGRef: number: 2; type: "Journal Article"; journalName: "Submitted
(13-DEC-2006) MCB, LUMC, Einthovenweg 20, Leiden, ZH 2300 RC,
Netherlands"
SGRef: number: 3; type: "Journal Article"
FEATURES Location/Qualifiers
source 1..6175
/mol_type="other DNA"
/organism="synthetic DNA construct"
primer_bind 1..17
/label="M13 rev"
/note="common sequencing primer, one of multiple similar
variants"
regulatory 68..448
/label="CMV.IE enhancer"
/note="CMV.IE enhancer"
/regulatory_class="enhancer"
enhancer 68..447
/label="CMV enhancer"
/note="human cytomegalovirus immediate early enhancer"
promoter 450..725
/label="chicken beta-actin promoter"
intron 726..1734
/label="chimeric intron"
/note="chimera between introns from chicken beta-actin and
rabbit beta-globin"
CDS 1845..2816
/gene="NKX2-5"
/label="Homeobox protein Nkx-2.5"
/note="Homeobox protein Nkx-2.5 from Homo sapiens.
Accession#: P52952"
polyA_signal 3144..3199
/label="beta-globin poly(A) signal"
/note="rabbit beta-globin polyadenylation signal (Gil and
Proudfoot, 1987)"
primer_bind complement(3576..3592)
/label="M13 fwd"
/note="common sequencing primer, one of multiple similar
variants"
promoter 4066..4170
/label="AmpR promoter"
CDS 4171..5028
/label="AmpR"
/note="beta-lactamase"
rep_origin 5202..5790
/label="ori"
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
protein_bind 6078..6099
/label="CAP binding site"
/note="CAP binding activates transcription in the presence
of cAMP."
promoter 6114..6144
/label="lac promoter"
/note="promoter for the E. coli lac operon"
protein_bind 6152..6168
/label="lac operator"
/note="The lac repressor binds to the lac operator to
inhibit transcription in E. coli. This inhibition can be
relieved by adding lactose or
isopropyl-beta-D-thiogalactopyranoside (IPTG)."
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