Basic Vector Information
- Vector Name:
- Integration-module-11-sequence
- Antibiotic Resistance:
- Ampicillin
- Length:
- 8403 bp
- Type:
- Integration vector
- Replication origin:
- ori
- Source/Author:
- Castillo-Hair S, Baerman E, Fujita M, Igoshin O
Integration-module-11-sequence vector Map
Integration-module-11-sequence vector Sequence
LOCUS V015849 8403 bp DNA circular SYN 29-JUL-2019
DEFINITION Exported.
ACCESSION V015849
VERSION V015849
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
.
REFERENCE 1 (bases 1 to 8403)
AUTHORS Castillo-Hair S, Baerman E, Fujita M, Igoshin O, Tabor J.
TITLE Optogenetic control of Bacillus subtilis gene expression
JOURNAL Nat Commun 10 (1), 3099 (2019)
PUBMED 31308373
REFERENCE 2 (bases 1 to 8403)
AUTHORS Castillo-Hair SM.
TITLE Direct Submission
JOURNAL Submitted (29-MAY-2019) Bioengineering, Rice University, 6100 Main
St., Houston, TX 77005, USA
REFERENCE 3 (bases 1 to 8403)
AUTHORS .
TITLE Direct Submission
COMMENT SGRef: number: 1; type: "Journal Article"; journalName: "Nat
Commun"; date: "2019"; volume: "10"; issue: "1"; pages: "3099"
SGRef: number: 2; type: "Journal Article"; journalName: "Submitted
(29-MAY-2019) Bioengineering, Rice University, 6100 Main St.,
Houston, TX 77005, USA"
FEATURES Location/Qualifiers
source 1..8403
/mol_type="other DNA"
/organism="synthetic DNA construct"
gene 115..634
/pseudo=""
/gene="amyE"
/label="amyE"
/note="alpha-amylase"
CDS complement(647..1360)
/label="superfolder GFP"
/note="GFP variant that folds robustly even when fused to
poorly folded proteins (Pedelacq et al., 2006)"
regulatory complement(1361..1384)
/label="MF001"
/note="MF001"
/regulatory_class="ribosome_binding_site"
regulatory complement(1385..1458)
/label="PrpsD"
/note="PrpsD"
/regulatory_class="promoter"
regulatory 1400
/label="+1"
/note="+1"
/regulatory_class="other"
regulatory complement(1408..1413)
/regulatory_class="minus_10_signal"
regulatory complement(1431..1436)
/regulatory_class="minus_35_signal"
gene 1765..2517
/gene="spc"
/label="spc"
CDS 1765..2517
/codon_start=1
/transl_table=11
/gene="spc"
/product="spectinomycin resistance protein"
/label="spc"
/protein_id="QDQ17183.1"
/translation="MNTYEQINKVKKILRKHLKNNLIGTYMFGSGVESGLKPNSDLDFL
VVVSEPLTDQSKEILIQKIRPISKKIGDKSNLRYIELTIIIQQEMVPWNHPPKQEFIYG
EWLQELYEQGYIPQKELNSDLTIMLYQAKRKNKRIYGNYDLEELLPDIPFSDVRRAIMD
SSEELIDNYQDDETNSILTLCRMILTMDTGKIIPKDIAGNAVAESSPLEHRERILLAVR
SYLGENIEWTNENVNLTINYLNNRLKKL"
misc_feature 2644..3833
/label="homology to PY79"
/note="homology to PY79"
gene 2644..3669
/pseudo=""
/gene="amyE"
/label="amyE"
/note="alpha-amylase"
CDS 5032..5763
/gene="ermC"
/label="rRNA adenine N-6-methyltransferase"
/note="rRNA adenine N-6-methyltransferase from
Staphylococcus aureus. Accession#: P02979"
rep_origin complement(6574..7162)
/direction=LEFT
/label="ori"
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
CDS complement(7336..8193)
/label="AmpR"
/note="beta-lactamase"
promoter complement(8194..8298)
/label="AmpR promoter"
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