Basic Vector Information
- Vector Name:
- pJF1153
- Antibiotic Resistance:
- Streptomycin
- Length:
- 6550 bp
- Type:
- Transformation vector
- Replication origin:
- ori
- Source/Author:
- Ruf S, Forner J, Hasse C, Kroop X
pJF1153 vector Map
pJF1153 vector Sequence
LOCUS V015653 6550 bp DNA circular SYN 01-FEB-2022
DEFINITION Exported.
ACCESSION V015653
VERSION V015653
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
.
REFERENCE 1 (bases 1 to 6550)
AUTHORS Ruf S, Forner J, Hasse C, Kroop X, Seeger S, Schollbach L, Schadach
A, Bock R.
TITLE High-efficiency generation of fertile transplastomic Arabidopsis
plants
JOURNAL Nat Plants 5 (3), 282-289 (2019)
PUBMED 30778165
REFERENCE 2 (bases 1 to 6550)
AUTHORS Forner J, Hasse C, Ruf S, Bock R.
TITLE Direct Submission
JOURNAL Submitted (06-JUL-2018) Organelle Biology, Biotechnology and
Molecular Ecophysiology, Max Planck Institute of Molecular Plant
Physiology, Am Muehlenberg 1, Potsdam, Brandenburg D-14476, Germany
REFERENCE 3 (bases 1 to 6550)
AUTHORS .
TITLE Direct Submission
COMMENT ##Assembly-Data-START##
Sequencing Technology :: Sanger dideoxy sequencing
##Assembly-Data-END##
SGRef: number: 1; type: "Journal Article"; journalName: "Nat
Plants"; date: "2019"; volume: "5"; issue: "3"; pages: "282-289"
SGRef: number: 2; type: "Journal Article"; journalName: "Submitted
(06-JUL-2018) Organelle Biology, Biotechnology and Molecular
Ecophysiology, Max Planck Institute of Molecular Plant Physiology,
Am Muehlenberg 1, Potsdam, Brandenburg D-14476, Germany"
FEATURES Location/Qualifiers
source 1..6550
/mol_type="other DNA"
/organism="synthetic DNA construct"
gene 1..521
/gene="psaB"
/label="psaB"
CDS 1..521
/codon_start=3
/transl_table=11
/gene="psaB"
/product="PSAB"
/label="psaB"
/protein_id="QBG49749.1"
/translation="GRGGTCDISAWDAFYLAVFWMLNTIGWVTFYWHWKHITLWQGNVS
QFNESSTYLMGWLRDYLWLNSSQLINGYNPFGMNSLSVWAWMFLFGHLVWATGFMFLIS
WRGYWQELIETLAWAHERTPLANLIRWKDKPVALSIVQARLVGLAHFSVGYIFTYAAFL
IASTSGKFG"
CDS 656..955
/gene="rps14"
/label="Small ribosomal subunit protein uS14c"
/note="Small ribosomal subunit protein uS14c from
Arabidopsis thaliana. Accession#: P56804"
tRNA 1119..1192
/product="tRNA-Met"
/label="trnfM"
/note="trnfM"
regulatory 1302..1451
/label="Zea mays clpP promoter"
/note="Zea mays clpP promoter"
/regulatory_class="promoter"
CDS 1453..2241
/label="SmR"
/note="aminoglycoside adenylyltransferase (Murphy, 1985)"
terminator 2252..2338
/label="rrnB T1 terminator"
/note="transcription terminator T1 from the E. coli rrnB
gene"
terminator 2430..2457
/label="rrnB T2 terminator"
/note="transcription terminator T2 from the E. coli rrnB
gene"
primer_bind complement(2477..2493)
/label="KS primer"
/note="common sequencing primer, one of multiple similar
variants"
tRNA complement(2553..2623)
/product="tRNA-Gly"
CDS complement(3177..3362)
/gene="psbZ"
/label="Photosystem II reaction center protein Z"
/note="Photosystem II reaction center protein Z from
Nicotiana tabacum. Accession#: P09974"
promoter complement(3701..3719)
/label="T7 promoter"
/note="promoter for bacteriophage T7 RNA polymerase"
primer_bind complement(3729..3745)
/label="M13 fwd"
/note="common sequencing primer, one of multiple similar
variants"
rep_origin 3887..4342
/label="f1 ori"
/note="f1 bacteriophage origin of replication; arrow
indicates direction of (+) strand synthesis"
promoter 4368..4472
/label="AmpR promoter"
CDS 4473..5330
/label="AmpR"
/note="beta-lactamase"
rep_origin 5504..6092
/label="ori"
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
protein_bind 6380..6401
/label="CAP binding site"
/note="CAP binding activates transcription in the presence
of cAMP."
promoter 6416..6446
/label="lac promoter"
/note="promoter for the E. coli lac operon"
protein_bind 6454..6470
/label="lac operator"
/note="The lac repressor binds to the lac operator to
inhibit transcription in E. coli. This inhibition can be
relieved by adding lactose or
isopropyl-beta-D-thiogalactopyranoside (IPTG)."
primer_bind 6478..6494
/label="M13 rev"
/note="common sequencing primer, one of multiple similar
variants"
promoter 6515..6533
/label="T3 promoter"
/note="promoter for bacteriophage T3 RNA polymerase"
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