Basic Vector Information
- Vector Name:
- pmKATE2rrnB
- Antibiotic Resistance:
- Ampicillin
- Length:
- 8381 bp
- Type:
- Fluorescent reporter vector
- Replication origin:
- ori
- Source/Author:
- van Gestel J, Weissing FJ, Kuipers OP, Kovacs AT.
pmKATE2rrnB vector Map
pmKATE2rrnB vector Sequence
LOCUS V004708 8381 bp DNA circular SYN 18-DEC-2018
DEFINITION Exported.
ACCESSION V004708
VERSION V004708
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
.
REFERENCE 1 (bases 1 to 8381)
AUTHORS van Gestel J, Weissing FJ, Kuipers OP, Kovacs AT.
TITLE Density of founder cells affects spatial pattern formation and
cooperation in Bacillus subtilis biofilms
JOURNAL ISME J 8 (10), 2069-2079 (2014)
PUBMED 24694715
REFERENCE 2 (bases 1 to 8381)
AUTHORS Kovacs AT.
TITLE Direct Submission
JOURNAL Submitted (14-JUN-2013) Terrestrial Biofilms Group, Friedrich
Schiller University of Jena, Neugasse 23, Jena, Thuringia 07743,
Germany
REFERENCE 3 (bases 1 to 8381)
TITLE Direct Submission
REFERENCE 4 (bases 1 to 8381)
AUTHORS .
TITLE Direct Submission
COMMENT ##Assembly-Data-START##
Sequencing Technology :: Sanger dideoxy sequencing
##Assembly-Data-END##
SGRef: number: 1; type: "Journal Article"; journalName: "ISME J";
date: "2014"; volume: "8"; issue: "10"; pages: "2069-2079"
SGRef: number: 2; type: "Journal Article"; journalName: "Submitted
(14-JUN-2013) Terrestrial Biofilms Group, Friedrich Schiller
University of Jena, Neugasse 23, Jena, Thuringia 07743, Germany"
SGRef: number: 3; type: "Journal Article"
FEATURES Location/Qualifiers
source 1..8381
/mol_type="other DNA"
/organism="synthetic DNA construct"
promoter 106..210
/label="AmpR promoter"
CDS 211..1068
/label="AmpR"
/note="beta-lactamase"
rep_origin 1242..1830
/direction=RIGHT
/label="ori"
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
CDS complement(2080..2859)
/gene="ant1"
/label="Spectinomycin 9-adenylyltransferase"
/note="Spectinomycin 9-adenylyltransferase from
Staphylococcus aureus (strain N315). Accession#: P0A0D1"
gene complement(3968..5005)
/gene="amyE"
/label="amyE"
/note="3` end"
CDS complement(5370..6017)
/gene="cat"
/label="Chloramphenicol acetyltransferase"
/note="Chloramphenicol acetyltransferase from
Staphylococcus aureus. Accession#: P00485"
regulatory 6330..6728
/gene="rrnB"
/regulatory_class="promoter"
gene 6330..6728
/gene="rrnB"
/label="rrnB"
CDS 6735..7424
/label="mKate2"
/note="monomeric far-red fluorescent protein (Shcherbo et
al., 2009)"
regulatory 7450..7538
/regulatory_class="terminator"
regulatory 7545..7631
/regulatory_class="terminator"
gene complement(7747..8267)
/gene="amyE"
/label="amyE"
/note="5` end"
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