Basic Vector Information
- Vector Name:
- pLvCmvMYOCDHA
- Antibiotic Resistance:
- Ampicillin
- Length:
- 9914 bp
- Type:
- Shuttle vector
- Replication origin:
- ori
- Source/Author:
- van Tuyn J, Pijnappels DA, de Vries AA, de Vries I, van der Velde-van Dijke I, Knaan-Shanzer S, van der Laarse A, Schalij MJ, Atsma DE.
- Promoter:
- RSV
pLvCmvMYOCDHA vector Map
pLvCmvMYOCDHA vector Sequence
LOCUS V004902 9914 bp DNA circular SYN 18-DEC-2018
DEFINITION Exported.
ACCESSION V004902
VERSION V004902
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
.
REFERENCE 1 (bases 1 to 9914)
AUTHORS van Tuyn J, Pijnappels DA, de Vries AA, de Vries I, van der
Velde-van Dijke I, Knaan-Shanzer S, van der Laarse A, Schalij MJ,
Atsma DE.
TITLE Fibroblasts from human postmyocardial infarction scars acquire
properties of cardiomyocytes after transduction with a recombinant
myocardin gene
JOURNAL FASEB J. 21 (12), 3369-3379 (2007)
PUBMED 17579192
REFERENCE 2 (bases 1 to 9914)
AUTHORS van Tuyn J.
TITLE Direct Submission
JOURNAL Submitted (13-DEC-2006) MCB, LUMC, Einthovenweg 20, Leiden, ZH 2300
RC, Netherlands
REFERENCE 3 (bases 1 to 9914)
TITLE Direct Submission
REFERENCE 4 (bases 1 to 9914)
AUTHORS .
TITLE Direct Submission
COMMENT SGRef: number: 1; type: "Journal Article"; journalName: "FASEB J.";
date: "2007"; volume: "21"; issue: "12"; pages: "3369-3379"
SGRef: number: 2; type: "Journal Article"; journalName: "Submitted
(13-DEC-2006) MCB, LUMC, Einthovenweg 20, Leiden, ZH 2300 RC,
Netherlands"
SGRef: number: 3; type: "Journal Article"
FEATURES Location/Qualifiers
source 1..9914
/mol_type="other DNA"
/organism="synthetic DNA construct"
promoter 3..229
/label="RSV promoter"
/note="Rous sarcoma virus enhancer/promoter"
repeat_region 212..410
LTR 230..410
/label="5' LTR (truncated)"
/note="truncated 5' long terminal repeat (LTR) from HIV-1"
misc_feature 457..582
/label="HIV-1 Psi"
/note="packaging signal of human immunodeficiency virus
type 1"
misc_feature 1075..1308
/label="RRE"
/note="The Rev response element (RRE) of HIV-1 allows for
Rev-dependent mRNA export from the nucleus to the
cytoplasm."
CDS 1493..1537
/label="gp41 peptide"
/note="antigenic peptide corresponding to amino acids 655
to 669 of the HIV envelope protein gp41 (Lutje Hulsik et
al., 2013)"
CDS 1686..1727
/note="Protein Tat from Human immunodeficiency virus type 1
group M subtype B (isolate WMJ22). Accession#: P12509"
/label="Protein Tat"
misc_feature 1799..1916
/label="cPPT/CTS"
/note="central polypurine tract and central termination
sequence of HIV-1"
enhancer 1939..2242
/label="CMV enhancer"
/note="human cytomegalovirus immediate early enhancer"
promoter 2243..2446
/label="CMV promoter"
/note="human cytomegalovirus (CMV) immediate early
promoter"
CDS 5632..5658
/label="HA"
/note="HA (human influenza hemagglutinin) epitope tag"
misc_feature 5701..6289
/label="WPRE"
/note="woodchuck hepatitis virus posttranscriptional
regulatory element"
LTR 6428..6661
/label="3' LTR (Delta-U3)"
/note="self-inactivating 3' long terminal repeat (LTR) from
HIV-1"
polyA_signal 6733..6867
/label="SV40 poly(A) signal"
/note="SV40 polyadenylation signal"
rep_origin 6894..7029
/label="SV40 ori"
/note="SV40 origin of replication"
promoter complement(7050..7068)
/label="T7 promoter"
/note="promoter for bacteriophage T7 RNA polymerase"
primer_bind complement(7078..7094)
/label="M13 fwd"
/note="common sequencing primer, one of multiple similar
variants"
rep_origin 7239..7694
/label="f1 ori"
/note="f1 bacteriophage origin of replication; arrow
indicates direction of (+) strand synthesis"
promoter 7723..7827
/label="AmpR promoter"
CDS 7828..8685
/label="AmpR"
/note="beta-lactamase"
rep_origin 8859..9447
/label="ori"
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
protein_bind 9735..9756
/label="CAP binding site"
/note="CAP binding activates transcription in the presence
of cAMP."
promoter 9772..9802
/label="lac promoter"
/note="promoter for the E. coli lac operon"
protein_bind 9810..9826
/label="lac operator"
/note="The lac repressor binds to the lac operator to
inhibit transcription in E. coli. This inhibition can be
relieved by adding lactose or
isopropyl-beta-D-thiogalactopyranoside (IPTG)."
primer_bind 9834..9850
/label="M13 rev"
/note="common sequencing primer, one of multiple similar
variants"
promoter 9871..9889
/label="T3 promoter"
/note="promoter for bacteriophage T3 RNA polymerase"
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