LOCUS V043865 9989 bp DNA circular SYN 01-JAN-1980
DEFINITION synthetic circular DNA.
ACCESSION V043865
VERSION V043865
KEYWORDS .
SOURCE .
ORGANISM .
.
FEATURES Location/Qualifiers
enhancer 235..614
/note="human cytomegalovirus immediate early enhancer"
/label="CMV enhancer"
promoter 615..818
/note="human cytomegalovirus (CMV) immediate early
promoter"
/label="CMV promoter"
protein_bind 820..838
/bound_moiety="tetracycline repressor TetR"
/gene="tetO"
/note="bacterial operator O2 for the tetR and tetA genes"
/label="tet operator"
protein_bind 841..859
/bound_moiety="tetracycline repressor TetR"
/gene="tetO"
/note="bacterial operator O2 for the tetR and tetA genes"
/label="tet operator"
CDS 1008..5867
/label="ALK(NM_004304)"
/note="ALK(NM_004304)"
/gene="ALK"
polyA_signal 5947..6171
/note="bovine growth hormone polyadenylation signal"
/label="bGH poly(A) signal"
protein_bind 6455..6502
/bound_moiety="FLP recombinase from the Saccharomyces
cerevisiae 2μ plasmid"
/note="FLP-mediated recombination occurs in the 8-bp core
sequence TCTAGAAA (Turan and Bode, 2011)."
/label="FRT"
CDS 6510..7532
/codon_start=1
/gene="aph(4)-Ia"
/note="confers resistance to hygromycin"
/product="aminoglycoside phosphotransferase from E. coli"
/transl_table=1
/translation="KKPELTATSVEKFLIEKFDSVSDLMQLSEGEESRAFSFDVGGRGY
VLRVNSCADGFYKDRYVYRHFASAALPIPEVLDIGEFSESLTYCISRRAQGVTLQDLPE
TELPAVLQPVAEAMDAIAAADLSQTSGFGPFGPQGIGQYTTWRDFICAIADPHVYHWQT
VMDDTVSASVAQALDELMLWAEDCPEVRHLVHADFGSNNVLTDNGRITAVIDWSEAMFG
DSQYEVANIFFWRPWLACMEQQTRYFERRHPELAGSPRLRAYMLRIGLDQLYQSLVDGN
FDDAAWAQGRCDAIVRSGAGTVGRTQIARRSAAVWTDGCVEVLADSGNRRPSTRPRAKE
*"
/label="HygR"
polyA_signal 7662..7783
/note="SV40 polyadenylation signal"
/label="SV40 poly(A) signal"
primer_bind complement(7832..7848)
/note="common sequencing primer, one of multiple similar
variants"
/label="M13 rev"
protein_bind 7856..7872
/bound_moiety="lac repressor encoded by lacI"
/note="The lac repressor binds to the lac operator to
inhibit transcription in E. coli. This inhibition can be
relieved by adding lactose or
isopropyl-β-D-thiogalactopyranoside (IPTG)."
/label="lac operator"
promoter complement(7880..7910)
/note="promoter for the E. coli lac operon"
/label="lac promoter"
protein_bind 7925..7946
/bound_moiety="E. coli catabolite activator protein"
/note="CAP binding activates transcription in the presence
of cAMP."
/label="CAP binding site"
rep_origin complement(8234..8822)
/direction=LEFT
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
/label="ori"
CDS complement(8993..9853)
/codon_start=1
/gene="bla"
/note="confers resistance to ampicillin, carbenicillin, and
related antibiotics"
/product="β-lactamase"
/transl_table=1
/translation="MSIQHFRVALIPFFAAFCLPVFA,HPETLVKVKDAEDQLGARVGY
IELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEY
SPVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDR
WEPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRS
ALPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGA
SLIKHW*"
/label="AmpR"
promoter complement(9854..9958)
/gene="bla"
/label="AmpR promoter"