Human TMEM192 ORF clone (NM_001100389)
Note: 3 Synonymous Mutations
- Name:
- pLV3-CMV-TMEM192(human)-mRFP1-HA-mCherry-Puro
- Accession ID:
- NM_001100389.2
- Antibiotic Resistance:
- Ampicillin
- Length:
- 8956 bp
- Type:
- Protein expression
- Replication origin:
- ori
- Host:
- Mammalian cells, Lentivirus
- Selection Marker:
- Puro;mCherry
- Copy Number:
- High
- Promoter:
- CMV
- 3' Primer:
- CPPT-R1
- Fusion Tag:
- mRFP1-HA
- Growth Strain(s):
- Stbl3
- Growth Temperature:
- 37℃
- Expression Method:
- Constiutive, Stable / Transient
- Transcript Definition:
- Homo sapiens transmembrane protein 192 (TMEM192), mRNA
Resources
Plasmid Protocol
1. Centrifuge at 5,000×g for 5 min.
2. Carefully open the tube and add 20 μl of sterile water to dissolve the DNA.
3. Close the tube and incubate for 10 minutes at room temperature.
4. Briefly vortex the tube and then do a quick spin to concentrate the liquid at the bottom. Speed is less than 5000×g.
5. Store the plasmid at -20 ℃.
6. The concentration of plasmid re-measurement sometimes differs from the nominal value, which may be due to the position of the lyophilized plasmid in the tube, the efficiency of the re-dissolution, the measurement bias, and adsorption on the wall of the tube, therefore, it is recommended to transform and extract the plasmid before using it
General Plasmid Transform Protocol
1. Take one 100μl of the competent cells and thaw it on ice for 10min, add 2μl of plasmid, then ice bath for 30min, then heat-shock it at 42℃ for 60s, do not stir, and then ice bath for 2min.
2. Add 900μl of LB liquid medium without antibiotics, and incubate at 37℃ for 45min (30℃ for 1-1.5 hours) with 180rpm shaking.
3. Centrifuge at 6000rpm for 5min, leave only 100μl of supernatant to resuspend the bacterial precipitate and spread it onto the target plasmid-resistant LB plate.
4. Invert the plate and incubate at 37℃ for 14h, or at 30℃ for 20h.
5. Pick a single colony into LB liquid medium, add the corresponding antibiotics, incubate at 220rpm for 14h, and extract the plasmid according to the experimental needs and the instructions of the plasmid extraction kit.
Human TMEM192 ORF clone (NM_001100389) Sequence
LOCUS V038280 8956 bp DNA circular SYN 01-JAN-1980
DEFINITION synthetic circular DNA.
ACCESSION V038280
VERSION V038280
KEYWORDS .
SOURCE .
ORGANISM .
.
FEATURES Location/Qualifiers
promoter join(8919..8956,1..473)
/note="human phosphoglycerate kinase 1 promoter"
/label="hPGK promoter"
CDS 495..1094
/codon_start=1
/gene="pac from Streptomyces alboniger"
/note="confers resistance to puromycin"
/product="puromycin N-acetyltransferase"
/transl_table=1
/translation="MTEYKPTVRLATRDDVPRAVRTLAAAFADYPATRHTVDPDRHIER
VTELQELFLTRVGLDIGKVWVADDGAAVAVWTTPESVEAGAVFAEIGPRMAELSGSRLA
AQQQMEGLLAPHRPKEPAWFLATVGVSPDHQGKGLGSAVVLPGVEAAERAGVPAFLETS
APRNLPFYERLGFTVTADVEVPEGPRTWCMTRKPGA*"
/label="PuroR"
LTR 1222..1455
/note="self-inactivating 3' long terminal repeat (LTR)
from HIV-1"
/label="3' LTR (ΔU3)"
polyA_signal 1527..1648
/note="SV40 polyadenylation signal"
/label="SV40 poly(A) signal"
rep_origin 1688..1823
/note="SV40 origin of replication"
/label="SV40 ori"
promoter complement(1844..1862)
/note="promoter for bacteriophage T7 RNA polymerase"
/label="T7 promoter"
primer_bind complement(1872..1888)
/note="common sequencing primer, one of multiple similar
variants"
/label="M13 fwd"
rep_origin 2030..2485
/direction=RIGHT
/note="f1 bacteriophage origin of replication; arrow
indicates direction of (+) strand synthesis"
/label="f1 ori"
promoter 2511..2615
/gene="bla"
/label="AmpR promoter"
CDS 2616..3476
/codon_start=1
/gene="bla"
/note="confers resistance to ampicillin, carbenicillin, and
related antibiotics"
/product="β-lactamase"
/transl_table=1
/translation="MSIQHFRVALIPFFAAFCLPVFA,HPETLVKVKDAEDQLGARVGY
IELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEY
SPVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDR
WEPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRS
ALPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGA
SLIKHW*"
/label="AmpR"
rep_origin 3647..4235
/direction=RIGHT
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
/label="ori"
protein_bind 4523..4544
/bound_moiety="E. coli catabolite activator protein"
/note="CAP binding activates transcription in the presence
of cAMP."
/label="CAP binding site"
promoter 4559..4589
/note="promoter for the E. coli lac operon"
/label="lac promoter"
protein_bind 4597..4613
/bound_moiety="lac repressor encoded by lacI"
/note="The lac repressor binds to the lac operator to
inhibit transcription in E. coli. This inhibition can be
relieved by adding lactose or
isopropyl-β-D-thiogalactopyranoside (IPTG)."
/label="lac operator"
primer_bind 4621..4637
/note="common sequencing primer, one of multiple similar
variants"
/label="M13 rev"
promoter 4658..4676
/note="promoter for bacteriophage T3 RNA polymerase"
/label="T3 promoter"
promoter 4704..4930
/note="Rous sarcoma virus enhancer/promoter"
/label="RSV promoter"
LTR 4931..5111
/note="truncated 5' long terminal repeat (LTR) from HIV-1"
/label="5' LTR (truncated)"
misc_feature 5158..5283
/note="packaging signal of human immunodeficiency virus
type 1"
/label="HIV-1 Ψ"
misc_feature 5776..6009
/note="The Rev response element (RRE) of HIV-1 allows for
Rev-dependent mRNA export from the nucleus to the
cytoplasm."
/label="RRE"
CDS 6194..6238
/codon_start=1
/note="recognized by the 2H10 single-chain llama nanobody"
/product="antigenic peptide corresponding to amino acids
655 to 669 of the HIV envelope protein gp41 (Lutje Hulsik
et al., 2013)"
/transl_table=1
/translation="KNEQELLELDKWASL"
/label="gp41 peptide"
promoter 6845..7048
/note="human cytomegalovirus (CMV) immediate early
promoter"
/label="CMV promoter"
CDS 7083..7895
/label="TMEM192(NM_001100389)"
/note="TMEM192(NM_001100389)"
/gene="TMEM192"
CDS 7896..8570
/codon_start=1
/note="mammalian codon-optimized"
/product="monomeric derivative of DsRed (Campbell et al.,
2002)"
/transl_table=1
/translation="MASSEDVIKEFMRFKVRMEGSVNGHEFEIEGEGEGRPYEGTQTAK
LKVTKGGPLPFAWDILSPQFQYGSKAYVKHPADIPDYLKLSFPEGFKWERVMNFEDGGV
VTVTQDSSLQDGEFIYKVKLRGTNFPSDGPVMQKKTMGWEASTERMYPEDGALKGEIKM
RLKLKDGGHYDAEVKTTYMAKKPVQLPGAYKTDIKLDITSHNEDYTIVEQYERAEGRHS
TGA"
/label="mRFP1"
CDS 8607..8627
/codon_start=1
/product="tobacco etch virus (TEV) protease recognition and
cleavage site"
/transl_table=1
/translation="ENLYFQS"
/label="TEV site"
CDS 8628..8708
/codon_start=1
/product="three tandem HA epitope tags"
/transl_table=1
/translation="YPYDVPDYAYPYDVPDYAYPYDVPDYA"
/label="3xHA"
misc_feature 8753..8870
/note="central polypurine tract and central termination
sequence of HIV-1"
/label="cPPT/CTS"