LOCUS V036785 7468 bp DNA circular SYN 01-JAN-1980
DEFINITION synthetic circular DNA.
ACCESSION V036785
VERSION V036785
KEYWORDS .
SOURCE .
ORGANISM .
.
FEATURES Location/Qualifiers
enhancer 50..429
/note="human cytomegalovirus immediate early enhancer"
/label="CMV enhancer"
promoter 430..633
/note="human cytomegalovirus (CMV) immediate early
promoter"
/label="CMV promoter"
CDS 706..2127
/label="HADHB(NM_000183)"
/note="HADHB(NM_000183)"
/gene="HADHB"
CDS 2134..2160
/codon_start=1
/product="HA (human influenza hemagglutinin) epitope tag"
/transl_table=1
/translation="YPYDVPDYA"
/label="HA"
CDS 2164..2190
/codon_start=1
/product="HA (human influenza hemagglutinin) epitope tag"
/transl_table=1
/translation="YPYDVPDYA"
/label="HA"
CDS 2194..2220
/codon_start=1
/product="HA (human influenza hemagglutinin) epitope tag"
/transl_table=1
/translation="YPYDVPDYA"
/label="HA"
misc_feature 2244..2832
/note="woodchuck hepatitis virus posttranscriptional
regulatory element"
/label="WPRE"
polyA_signal 2898..2946
/note="herpes simplex virus thymidine kinase
polyadenylation signal (Cole and Stacy, 1985)"
/label="HSV TK poly(A) signal"
rep_origin 3148..3576
/direction=RIGHT
/note="f1 bacteriophage origin of replication; arrow
indicates direction of (+) strand synthesis"
/label="f1 ori"
promoter 3590..3919
/note="SV40 enhancer and early promoter"
/label="SV40 promoter"
CDS 3986..4780
/codon_start=1
/gene="aph(3')-II (or nptII)"
/note="confers resistance to neomycin, kanamycin, and G418
(Geneticin®)"
/product="aminoglycoside phosphotransferase from Tn5"
/transl_table=1
/translation="MIEQDGLHAGSPAAWVERLFGYDWAQQTIGCSDAAVFRLSAQGRP
VLFVKTDLSGALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDLLS
SHLAPAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQ
GLAPAELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGVADRYQDIA
LATRDIAEELGGEWADRFLVLYGIAAPDSQRIAFYRLLDEFF*"
/label="NeoR/KanR"
polyA_signal 4956..5077
/note="SV40 polyadenylation signal"
/label="SV40 poly(A) signal"
primer_bind complement(5126..5142)
/note="common sequencing primer, one of multiple similar
variants"
/label="M13 rev"
protein_bind 5150..5166
/bound_moiety="lac repressor encoded by lacI"
/note="The lac repressor binds to the lac operator to
inhibit transcription in E. coli. This inhibition can be
relieved by adding lactose or
isopropyl-β-D-thiogalactopyranoside (IPTG)."
/label="lac operator"
promoter complement(5174..5204)
/note="promoter for the E. coli lac operon"
/label="lac promoter"
protein_bind 5219..5240
/bound_moiety="E. coli catabolite activator protein"
/note="CAP binding activates transcription in the presence
of cAMP."
/label="CAP binding site"
rep_origin complement(5528..6116)
/direction=LEFT
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
/label="ori"
CDS complement(6287..7147)
/codon_start=1
/gene="bla"
/note="confers resistance to ampicillin, carbenicillin, and
related antibiotics"
/product="β-lactamase"
/transl_table=1
/translation="MSIQHFRVALIPFFAAFCLPVFA,HPETLVKVKDAEDQLGARVGY
IELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEY
SPVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDR
WEPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRS
ALPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGA
SLIKHW*"
/label="AmpR"
promoter complement(7148..7252)
/gene="bla"
/label="AmpR promoter"