Basic Vector Information
- Vector Name:
- pOpt_Clover_Hyg
- Antibiotic Resistance:
- Ampicillin
- Length:
- 6831 bp
- Type:
- Cloning vector
- Replication origin:
- ori
- Source/Author:
- Lauersen KJ, Mussgnug JH, Kruse O.
pOpt_Clover_Hyg vector Map
pOpt_Clover_Hyg vector Sequence
LOCUS V004221 6831 bp DNA circular SYN 18-DEC-2018
DEFINITION Exported.
ACCESSION V004221
VERSION V004221
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
.
REFERENCE 1 (bases 1 to 6831)
AUTHORS Lauersen KJ, Mussgnug JH, Kruse O.
TITLE Efficient targeted expression of nuclear transgenes in Chlamydomonas
reinhardtii with a novel, modular vector toolkit
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 6831)
AUTHORS Lauersen KJ, Mussgnug JH, Kruse O.
TITLE Direct Submission
JOURNAL Submitted (25-JUN-2014) Algae Biotechnology and Bioenergy,
University of Bielefeld Center for Biotechnology, Universitaetsstr
27, Bielefeld, NRW 33615, Germany
REFERENCE 3 (bases 1 to 6831)
AUTHORS Lauersen KJ, Mussgnug JH, Kruse O.
TITLE Direct Submission
JOURNAL Submitted (18-MAY-2016) Algae Biotechnology and Bioenergy,
University of Bielefeld Center for Biotechnology, Universitaetsstr
27, Bielefeld, NRW 33615, Germany
REFERENCE 4 (bases 1 to 6831)
TITLE Direct Submission
REFERENCE 5 (bases 1 to 6831)
AUTHORS .
TITLE Direct Submission
COMMENT ##Assembly-Data-START##
Sequencing Technology :: Sanger dideoxy sequencing
##Assembly-Data-END##
SGRef: number: 1; type: "Journal Article"; journalName:
"Unpublished"
SGRef: number: 2; type: "Journal Article"; journalName: "Submitted
(25-JUN-2014) Algae Biotechnology and Bioenergy, University of
Bielefeld Center for Biotechnology, Universitaetsstr 27, Bielefeld,
NRW 33615, Germany"
SGRef: number: 3; type: "Journal Article"; journalName: "Submitted
(18-MAY-2016) Algae Biotechnology and Bioenergy, University of
Bielefeld Center for Biotechnology, Universitaetsstr 27, Bielefeld,
NRW 33615, Germany"
SGRef: number: 4; type: "Journal Article"
On May 18, 2016 this sequence version replaced KM061067.1.
FEATURES Location/Qualifiers
source 1..6831
/mol_type="other DNA"
/organism="synthetic DNA construct"
primer_bind 489..505
/label="M13 fwd"
/note="common sequencing primer, one of multiple similar
variants"
promoter 515..533
/label="T7 promoter"
/note="promoter for bacteriophage T7 RNA polymerase"
CDS 1247..1258
/label="Factor Xa site"
/note="Factor Xa recognition and cleavage site"
CDS 2269..2280
/label="Factor Xa site"
/note="Factor Xa recognition and cleavage site"
CDS 2293..2316
/label="Strep-Tag II"
/note="peptide that binds Strep-Tactin(R), an engineered
form of streptavidin"
CDS 3266..4261
/gene="hyg"
/label="Hygromycin-B 7''-O-kinase"
/note="Hygromycin-B 7''-O-kinase from Streptomyces
hygroscopicus. Accession#: P09979"
promoter complement(4531..4549)
/label="T3 promoter"
/note="promoter for bacteriophage T3 RNA polymerase"
primer_bind complement(4570..4586)
/label="M13 rev"
/note="common sequencing primer, one of multiple similar
variants"
protein_bind complement(4594..4610)
/label="lac operator"
/note="The lac repressor binds to the lac operator to
inhibit transcription in E. coli. This inhibition can be
relieved by adding lactose or
isopropyl-beta-D-thiogalactopyranoside (IPTG)."
promoter complement(4618..4648)
/label="lac promoter"
/note="promoter for the E. coli lac operon"
protein_bind complement(4663..4684)
/label="CAP binding site"
/note="CAP binding activates transcription in the presence
of cAMP."
rep_origin complement(4972..5560)
/direction=LEFT
/label="ori"
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
CDS complement(5734..6591)
/label="AmpR"
/note="beta-lactamase"
promoter complement(6592..6696)
/label="AmpR promoter"
rep_origin complement(join(6723..6831,1..347))
/direction=LEFT
/label="f1 ori"
/note="f1 bacteriophage origin of replication; arrow
indicates direction of (+) strand synthesis"
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