Basic Vector Information
- Vector Name:
- pRED419
- Antibiotic Resistance:
- Kanamycin
- Length:
- 4325 bp
- Type:
- Gateway recycling vector
- Replication origin:
- ori
- Source/Author:
- Kimura T, Nakao A, Murata S, Kobayashi Y, Tanaka Y, Shibahara K, Kawazu T, Nakagawa T.
pRED419 vector Map
pRED419 vector Sequence
LOCUS 40924_36468 4325 bp DNA circular SYN 18-DEC-2018
DEFINITION Gateway recycling vector pRED419 DNA, complete sequence.
ACCESSION .
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 4325)
AUTHORS Kimura T, Nakao A, Murata S, Kobayashi Y, Tanaka Y, Shibahara K,
Kawazu T, Nakagawa T.
TITLE Development of the gateway recycling cloning system for multiple
linking of expression cassettes in a defined order, and direction on
gateway compatible binary vectors
JOURNAL Biosci. Biotechnol. Biochem. 77 (2), 430-434 (2013)
PUBMED 23391940
REFERENCE 2 (bases 1 to 4325)
AUTHORS Kimura T, Shibahara K, Tanaka Y, Nakao A, Kawazu T, Nakagawa T.
TITLE Direct Submission
JOURNAL Submitted (02-OCT-2012) Contact:Tsuyoshi Nakagawa Shimane
University, Center for Integrated Research in Science; 1060
Nishikawatsu, Matsue, Shimane 690-8504, Japan
REFERENCE 3 (bases 1 to 4325)
TITLE Direct Submission
REFERENCE 4 (bases 1 to 4325)
AUTHORS .
TITLE Direct Submission
COMMENT SGRef: number: 1; type: "Journal Article"; journalName: "Biosci.
Biotechnol. Biochem."; date: "2013"; volume: "77"; issue: "2";
pages: "430-434"
COMMENT SGRef: number: 2; type: "Journal Article"; journalName: "Submitted
(02-OCT-2012) Contact:Tsuyoshi Nakagawa Shimane University, Center
for Integrated Research in Science; 1060 Nishikawatsu, Matsue,
Shimane 690-8504, Japan"
COMMENT SGRef: number: 3; type: "Journal Article"
COMMENT constructed using pDONR201.
FEATURES Location/Qualifiers
source 1..4325
/mol_type="other DNA"
/organism="synthetic DNA construct"
protein_bind 28..127
/label=attL1
/note="recombination site for the Gateway(R) LR reaction"
primer_bind 159..175
/label=M13 rev
/note="common sequencing primer, one of multiple similar
variants"
misc_feature complement(188..244)
/label=MCS
/note="pUC18/19 multiple cloning site"
primer_bind complement(245..261)
/label=M13 fwd
/note="common sequencing primer, one of multiple similar
variants"
protein_bind 803..927
/label=attR4
/note="recombination site for the Gateway(R) LR reaction"
promoter 952..982
/label=lac UV5 promoter
/note="E. coli lac promoter with an 'up' mutation"
misc_feature 1254..1302
/label=rare cutter sites
/note="rare cutter sites"
protein_bind complement(1569..1692)
/label=attR3
/note="recombination site for the Gateway(R) LR reaction"
protein_bind complement(2198..2297)
/label=attL2
/note="recombination site for the Gateway(R) LR reaction"
CDS 2420..3226
/codon_start=1
/label=KanR
/note="aminoglycoside phosphotransferase"
/translation="MSHIQRETSRPRLNSNMDADLYGYKWARDNVGQSGATIYRLYGKP
DAPELFLKHGKGSVANDVTDEMVRLNWLTEFMPLPTIKHFIRTPDDAWLLTTAIPGKTA
FQVLEEYPDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASD
FDDERNGWPVEQVWKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGIAD
RYQDLAILWNCLGEFSPSLQKRLFQKYGIDNPDMNKLQFHLMLDEFF"
rep_origin 3372..3960
/direction=RIGHT
/label=ori
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
terminator complement(4095..4122)
/label=rrnB T2 terminator
/note="transcription terminator T2 from the E. coli rrnB
gene"
terminator complement(4214..4300)
/label=rrnB T1 terminator
/note="transcription terminator T1 from the E. coli rrnB
gene"
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