Basic Vector Information
- Vector Name:
- pPxylA+-cel8A
- Antibiotic Resistance:
- Ampicillin
- Length:
- 8084 bp
- Type:
- Shuttle vector
- Replication origin:
- ori
- Source/Author:
- Heinze S, Zimmermann K, Ludwig C, Heinzlmeir S, Schwarz WH, Zverlov VV, Liebl W, Kornberger P.
pPxylA+-cel8A vector Map
pPxylA+-cel8A vector Sequence
LOCUS 40924_35718 8084 bp DNA circular SYN 18-DEC-2018
DEFINITION Shuttle vector pPxylA+-cel8A, complete sequence.
ACCESSION .
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 8084)
AUTHORS Heinze S, Zimmermann K, Ludwig C, Heinzlmeir S, Schwarz WH, Zverlov
VV, Liebl W, Kornberger P.
TITLE Efficient secretory heterologous enzyme production in the novel host
Paenibacillus polymyxa by usage of its promoter sequences
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 8084)
AUTHORS Heinze S, Zimmermann K, Ludwig C, Heinzlmeir S, Schwarz WH, Zverlov
VV, Liebl W, Kornberger P.
TITLE Direct Submission
JOURNAL Submitted (09-MAY-2018) Department for Microbiology, Technical
University of Munich, Emil-Ramann-Str. 4, Freising, Bavaria 85354,
Germany
REFERENCE 3 (bases 1 to 8084)
TITLE Direct Submission
REFERENCE 4 (bases 1 to 8084)
AUTHORS .
TITLE Direct Submission
COMMENT SGRef: number: 1; type: "Journal Article"; journalName:
"Unpublished"
COMMENT SGRef: number: 2; type: "Journal Article"; journalName: "Submitted
(09-MAY-2018) Department for Microbiology, Technical University of
Munich, Emil-Ramann-Str. 4, Freising, Bavaria 85354, Germany"
COMMENT SGRef: number: 3; type: "Journal Article"
COMMENT ##Assembly-Data-START##
Sequencing Technology :: Sanger dideoxy sequencing
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..8084
/mol_type="other DNA"
/organism="synthetic DNA construct"
rep_origin complement(79..667)
/direction=LEFT
/label=ori
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
CDS complement(841..1698)
/label=AmpR
/note="beta-lactamase"
promoter complement(1699..1803)
/label=AmpR promoter
CDS complement(1832..2116)
/codon_start=1
/gene="traJ"
/product="TraJ"
/label=traJ
/protein_id="AXF54489.1"
/translation="MADETKPTRKGSPPIKVYCLPDERRAIEEKAAAAGMSLSAYLLAV
GQGYKITGVVDYEHVRELARINGDLGQQKAHYVNHHPNQVFWGRGAVKH"
gene complement(1832..2116)
/gene="traJ"
/label=traJ
oriT complement(2149..2258)
/direction=LEFT
/label=oriT
/note="incP origin of transfer"
CDS complement(2515..3276)
/codon_start=1
/gene="kanR"
/product="KanR"
/label=kanR
/note="Kanamycin Resistance"
/protein_id="AXF54490.1"
/translation="MNGPIIMTREERMKIVHEIKERILDKYGDDVKAIGVYGSLGRQTD
GPYSDIEMMCVMSTEEAEFSHEWTTGEWKVEVNFDSEEILLDYASQVESDWPLTHGQFF
SILPIYDSGGYLEKVYQTAKSVEAQTFHDAICALIVEELFEYAGKWRNIRVQGPTTFLP
SLTVQVAMAGAMLIGLHHRICYTTSASVLTEAVKQSDLPSGYDHLCQFVMSGQLSDSEK
LLESLENFWNGIQEWTERHGYIVDVSKRIPF"
gene complement(2515..3276)
/gene="kanR"
/label=kanR
CDS complement(3448..4449)
/label=repB
/note="RepB replication protein"
CDS complement(5063..6229)
/codon_start=1
/gene="xylR"
/product="XylR"
/label=xylR
/note="XylR from B. megaterium xyl-operon"
/protein_id="AXF54491.1"
/translation="MVIIQIADQALVKKMNQKLILDEILKNSPVSRATLSEITGLNKST
VSSQVNTLLEKDFIFEIGAGQSRGGRRPVMLVFNKNAGYSIGIDIGVDYLNGILTDLEG
NIILEKTSDLSSSSASEVKEILFALIHGFVTHMPESPYGLVGIGICVPGLVDRHQQIIF
MPNLNWNIKDLQFLIESEFNVPVFVENEANAGAYGEKVFGMTKNYENIVYISINIGIGT
GLVINNELYKGVQGFSGEMGHMTIDFNGPKCSCGNRGCWELYASEKALLASLSKEEKNI
SRKEIVERANKNDVEMLNALQNFGFYIGIGLTNILNTFDIEAVILRNHIIESHPIVLNT
IKNEVSSRVHSHLDNKCELLPSSLGKNAPALGAVSIVIDSFLSVTPIS"
gene complement(5063..6229)
/gene="xylR"
/label=xylR
regulatory 6333..6367
/note="PxylA, xylose inducible promoter, derived from
pHIS1525"
/regulatory_class="promoter"
misc_feature 6369..6397
/label=XylR binding site
/note="XylR binding site"
regulatory 6438..6447
/note="rbs+, ribosome binding site optimized for B.
megaterium"
/regulatory_class="ribosome_binding_site"
CDS 6461..6544
/codon_start=1
/gene="SPLipB-Cel8A-His6"
/product="LipB signal peptide"
/label=SPLipB-Cel8A-His6
/protein_id="AXF54492.1"
/translation="MKKVLMAFIICLSLILSVLAAPPSGAKA"
CDS 7904..7921
/label=6xHis
/note="6xHis affinity tag"
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