Basic Vector Information
- Vector Name:
- pPROBE-NI'
- Antibiotic Resistance:
- Kanamycin
- Length:
- 9689 bp
- Type:
- Promoter probe vector
- Replication origin:
- pBBR1 oriV
- Source/Author:
- Miller WG, Leveau JH, Lindow SE.
- Promoter:
- T7
pPROBE-NI' vector Map
pPROBE-NI' vector Sequence
LOCUS V003922 9689 bp DNA circular SYN 18-DEC-2018
DEFINITION Exported.
ACCESSION V003922
VERSION V003922
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
.
REFERENCE 1 (bases 1 to 9689)
AUTHORS Miller WG, Leveau JH, Lindow SE.
TITLE Improved gfp and inaZ broad-host-range promoter-probe vectors
JOURNAL Mol. Plant Microbe Interact. 13 (11), 1243-1250 (2000)
PUBMED 11059491
REFERENCE 2 (bases 1 to 9689)
AUTHORS Leveau JHJ., Miller WG, Lindow SE.
TITLE Direct Submission
REFERENCE 3 (bases 1 to 9689)
TITLE Direct Submission
REFERENCE 4 (bases 1 to 9689)
AUTHORS .
TITLE Direct Submission
COMMENT SGRef: number: 1; type: "Journal Article"; journalName: "Mol. Plant
Microbe Interact."; date: "2000"; volume: "13"; issue: "11"; pages:
"1243-1250"
SGRef: number: 2; type: "Journal Article"; journalName: "Submitted
(13-JUL-2000) Plant "
SGRef: number: 3; type: "Journal Article"
FEATURES Location/Qualifiers
source 1..9689
/mol_type="other DNA"
/organism="synthetic DNA construct"
rep_origin 1023..1792
/label="pBBR1 oriV"
/note="replication origin of the broad-host-range plasmid
pBBR1 from Bordetella bronchiseptica; requires the pBBR1
Rep protein for replication"
CDS 1793..2452
/label="pBBR1 Rep"
/note="replication protein for the broad-host-range plasmid
pBBR1 from Bordetella bronchiseptica"
primer_bind 3162..3178
/label="M13 fwd"
/note="common sequencing primer, one of multiple similar
variants"
promoter 3188..3206
/label="T7 promoter"
/note="promoter for bacteriophage T7 RNA polymerase"
terminator 3247..3333
/label="rrnB T1 terminator"
/note="transcription terminator T1 from the E. coli rrnB
gene"
regulatory 3420..3592
/label="T1 rrnB terminator region"
/note="T1 rrnB terminator region"
/regulatory_class="terminator"
terminator 3428..3514
/gene="Escherichia coli rrnB"
/label="rrnB T1 terminator"
/note="transcription terminator T1 from the E. coli rrnB
gene"
regulatory 3601..3773
/label="T1 rrnB terminator region"
/note="T1 rrnB terminator region"
/regulatory_class="terminator"
terminator 3609..3695
/gene="Escherichia coli rrnB"
/label="rrnB T1 terminator"
/note="transcription terminator T1 from the E. coli rrnB
gene"
regulatory 3782..3954
/label="T1 rrnB terminator region"
/note="T1 rrnB terminator region"
/regulatory_class="terminator"
terminator 3790..3876
/gene="Escherichia coli rrnB"
/label="rrnB T1 terminator"
/note="transcription terminator T1 from the E. coli rrnB
gene"
misc_feature 3973..4022
/note="multicloning site; EcoRI to HindIII"
regulatory 4050..4054
/label="putative"
/note="putative"
/regulatory_class="ribosome_binding_site"
CDS 4062..7661
/gene="inaZ"
/label="Ice nucleation protein"
/note="Ice nucleation protein from Pseudomonas syringae pv.
syringae. Accession#: P06620"
terminator complement(7685..7728)
/label="rrnB T1 terminator"
/note="transcription terminator T1 from the E. coli rrnB
gene"
promoter complement(7880..7898)
/label="T3 promoter"
/note="promoter for bacteriophage T3 RNA polymerase"
primer_bind complement(7919..7935)
/label="M13 rev"
/note="common sequencing primer, one of multiple similar
variants"
protein_bind complement(7943..7959)
/label="lac operator"
/note="The lac repressor binds to the lac operator to
inhibit transcription in E. coli. This inhibition can be
relieved by adding lactose or
isopropyl-beta-D-thiogalactopyranoside (IPTG)."
promoter complement(7967..7997)
/label="lac promoter"
/note="promoter for the E. coli lac operon"
protein_bind complement(8012..8033)
/label="CAP binding site"
/note="CAP binding activates transcription in the presence
of cAMP."
CDS complement(8441..9232)
/label="NeoR/KanR"
/note="aminoglycoside phosphotransferase"
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