pCRB62 vector (V008182)

LOCUS       40924_13355        5914 bp DNA     circular SYN 17-DEC-2018
DEFINITION  C. glutamicum-E. coli shuttle vector pCRB62, complete sequence.
ACCESSION   .
VERSION     .
KEYWORDS    .
SOURCE      synthetic DNA construct
  ORGANISM  synthetic DNA construct
REFERENCE   1  (bases 1 to 5914)
  AUTHORS   Okibe N, Suzuki N, Inui M, Yukawa H.
  TITLE     Antisense-RNA-mediated plasmid copy number control in pCG1-family 
            plasmids, pCGR2 and pCG1, in Corynebacterium glutamicum
  JOURNAL   Microbiology (Reading, Engl.) 156 (PT 12), 3609-3623 (2010)
  PUBMED    20798162
REFERENCE   2  (bases 1 to 5914)
  AUTHORS   Gunji W, Inui M.
  TITLE     Direct Submission
  JOURNAL   Submitted (16-APR-2010) Molecular Microbiology and Biotechnology 
            Group, Research Institute of Innovative Technology for the Earth 
            (RITE), 9-2 Kizugawadai, Kizugawa, Kyoto 619-0292, Japan
REFERENCE   3  (bases 1 to 5914)
  TITLE     Direct Submission
REFERENCE   4  (bases 1 to 5914)
  AUTHORS   .
  TITLE     Direct Submission
COMMENT     SGRef: number: 1; type: "Journal Article"; journalName: 
            "Microbiology (Reading, Engl.) 156 (PT 12), 3609-3623 (2010)"
COMMENT     SGRef: number: 2; type: "Journal Article"; journalName: "Submitted 
            (16-APR-2010) Molecular Microbiology and Biotechnology Group, 
            Research Institute of Innovative Technology for the Earth (RITE), 
            9-2 Kizugawadai, Kizugawa, Kyoto 619-0292, Japan"
COMMENT     SGRef: number: 3; type: "Journal Article"
FEATURES             Location/Qualifiers
     source          1..5914
                     /mol_type="other DNA"
                     /organism="synthetic DNA construct"
     protein_bind    265..286
                     /label=CAP binding site
                     /note="CAP binding activates transcription in the presence
                     of cAMP."
     promoter        301..331
                     /label=lac promoter
                     /note="promoter for the E. coli lac operon"
     protein_bind    339..355
                     /label=lac operator
                     /note="The lac repressor binds to the lac operator to
                     inhibit transcription in E. coli. This inhibition can be 
                     relieved by adding lactose or 
                     isopropyl-beta-D-thiogalactopyranoside (IPTG)."
     primer_bind     363..379
                     /label=M13 rev
                     /note="common sequencing primer, one of multiple similar 
                     variants"
     misc_feature    389..445
                     /label=MCS
                     /note="pUC18/19 multiple cloning site"
     primer_bind     complement(449..465)
                     /label=M13 fwd
                     /note="common sequencing primer, one of multiple similar 
                     variants"
     rep_origin      complement(791..1379)
                     /direction=LEFT
                     /label=ori
                     /note="high-copy-number ColE1/pMB1/pBR322/pUC origin of 
                     replication"
     CDS             1592..2191
                     /codon_start=1
                     /gene="parA"
                     /product="ParA"
                     /label=parA
                     /protein_id="ADR57706.1"
                     /translation="MPILTIAHTKGGVGKTTSAVLLCAAAHARGLAVTLIDSDAQGTAT
                     AWAHAAEEAGDTFPWPIITAATPAHLARTLDGHDGLVIVDTPPGGYEVIETAIEAGDLI
                     LIPTSASPLDINRVWPTVEATSHKPAVVCLSQIDSRTTLPKIARTALENEGVVVAETEI
                     PAREALRHMYATTPQRLYGYDELLTELLSSNLLGEH"
     gene            1592..2191
                     /gene="parA"
                     /label=parA
     CDS             2191..2418
                     /codon_start=1
                     /gene="parB"
                     /product="ParB"
                     /label=parB
                     /protein_id="ADR57707.1"
                     /translation="MADLSKKLAKTPVTSAPQKKVAETFTTATEKPTRTTIYLPTSLAK
                     RLKHAAVEEERSVSAILAGLAEDWLNKEDD"
     gene            2191..2418
                     /gene="parB"
                     /label=parB
     CDS             3193..4650
                     /codon_start=1
                     /gene="repA"
                     /product="RepA"
                     /label=repA
                     /note="pCGR2 RepA"
                     /protein_id="ADR57705.1"
                     /translation="MSLPSKGRSSTPTGVRVPQPLPTYRDTGGLDDTPAGFTDRDALID
                     HLGRKAIHGSKDRDFGKAYYRHEDGTLRPRLYRVDSEALARCQYVMLTTQQYAAVLVVD
                     IDQPGQSGGHPADLSPEVRQRMSALIEHNLGPSWVGINPQNGKAQAIWLIDPVYADKSG
                     KSRHMSLLAATSRALGELLDHDPNFSHRFSRSPFYDGNDPTAYRWYCQHKRVRRLADLL
                     KEIRTMTGQEQYTKPRQQFSSGRELINAVKTRREEAQAFKALAQDVETELSTELDQYDP
                     ELIDGVRVLWISQGRAARDETAFRYALKTCHRLRAAGERMTDAAIIDAYEHAYNVAQRH
                     GGDGRDSEMPPMRDRQTMARRVRGYVTQSKTDMGTSASPGRATSTERKALATMGRRGGK
                     KAAERWKDRDSDYAQSELKKLEHTHRVNKARGISTKSRISQMVNDQYLQTGTIPSWREI
                     ADDLGLSRATVARHVAVLKKSGEYPEF"
     gene            3193..4650
                     /gene="repA"
                     /label=repA
     CDS             complement(4987..5799)
                     /codon_start=1
                     /label=KanR
                     /note="aminoglycoside phosphotransferase"
                     /translation="MSHIQRETSCSKPRLNSNMDADLYGYKWARDNVGQSGATIYRLYG
                     KPDAPELFLKHGKGSVANDVTDEMVRLNWLTEFMPLPTIKHFIRTPDDAWLLTTAIPGK
                     TAFQVLEEYPDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDA
                     SDFDDERNGWPVEQVWKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGI
                     ADRYQDLAILWNCLGEFSPSLQKRLFQKYGIDNPDMNKLQFHLMLDEFF"