Basic Vector Information
- Vector Name:
- pCHIKV-LR ic
- Antibiotic Resistance:
- Ampicillin
- Length:
- 13756 bp
- Type:
- Cloning vector
- Replication origin:
- ori
- Source/Author:
- Tsetsarkin K, Higgs S, McGee CE, De Lamballerie X, Charrel RN, Vanlandingham DL.
pCHIKV-LR ic vector Map
pCHIKV-LR ic vector Sequence
LOCUS V008521 13756 bp DNA circular SYN 17-DEC-2018
DEFINITION Exported.
ACCESSION V008521
VERSION V008521
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
.
REFERENCE 1 (bases 1 to 13756)
AUTHORS Tsetsarkin K, Higgs S, McGee CE, De Lamballerie X, Charrel RN,
Vanlandingham DL.
TITLE Infectious clones of Chikungunya virus (La Reunion isolate) for
vector competence studies
JOURNAL Vector Borne Zoonotic Dis. 6 (4), 325-337 (2006)
PUBMED 17187566
REFERENCE 2 (bases 1 to 13756)
AUTHORS Tsetsarkin KA, Vanlandingham DL, Higgs S.
TITLE Direct Submission
JOURNAL Submitted (17-OCT-2007) Pathology, University of Texas Medical
Branch, University Blvd, Galveston, TX 77555-0609, USA
REFERENCE 3 (bases 1 to 13756)
TITLE Direct Submission
REFERENCE 4 (bases 1 to 13756)
AUTHORS .
TITLE Direct Submission
COMMENT SGRef: number: 1; type: "Journal Article"; journalName: "Vector
Borne Zoonotic Dis."; date: "2006"; volume: "6"; issue: "4"; pages:
"325-337"
SGRef: number: 2; type: "Journal Article"; journalName: "Submitted
(17-OCT-2007) Pathology, University of Texas Medical Branch,
University Blvd, Galveston, TX 77555-0609, USA"
SGRef: number: 3; type: "Journal Article"
FEATURES Location/Qualifiers
source 1..13756
/mol_type="other DNA"
/organism="synthetic DNA construct"
5'UTR 1..76
CDS 77..7498
/note="Polyprotein P1234 from Chikungunya virus (strain
S27-African prototype). Accession#: Q8JUX6"
/label="Polyprotein P1234"
CDS 7567..11310
/note="Structural polyprotein from Chikungunya virus
(strain S27-African prototype). Accession#: Q8JUX5"
/label="Structural polyprotein"
3'UTR 11314..11811
polyA_site 11812
promoter 11927..12031
/label="AmpR promoter"
CDS 12032..12889
/label="AmpR"
/note="beta-lactamase"
rep_origin 13063..13651
/direction=RIGHT
/label="ori"
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
promoter 13739..13756
/label="SP6 promoter"
/note="promoter for bacteriophage SP6 RNA polymerase"
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