pBACOV vector (Cat. No.: V009316)
Note: pBACOV (Bacillus conjugation vector) is a broad-host-range E. coli–Bacillus shuttle vector (GenBank MG599120.1). Derived from pBE-S, it carries the ColE1 ori and AmpR for E. coli, the pUB110 pUB ori and KanR for Bacillus, an RK2 oriT/traJ module for conjugative "transmating", and an expression cassette with the B. subtilis PaprE promoter, aprE signal peptide, MCS and C-terminal His6 tag. Transmating worked in 9 of 11 species tested; PaprE drove sfGFP in 8.
- Name:
- pBACOV
- Antibiotic Resistance:
- Ampicillin, Kanamycin
- Length:
- 5396 bp
- Type:
- Shuttle vector
- Replication origin:
- ori
- Source/Author:
- Heinze S, Kornberger P, Graetz C, Schwarz WH, Zverlov VV, Liebl W.
- Copy Number:
- High copy number
- Growth Strain(s):
- Top10
- Growth Temperature:
- 37℃
Resources
Plasmid Protocol
1. Centrifuge at 5,000×g for 5 min.
2. Carefully open the tube and add sterile water to dissolve the DNA: add 20 μl for 5 μg plasmid, and 100 μl for 100 μg plasmid.
3. Close the tube and incubate for 10 minutes at room temperature.
4. Briefly vortex the tube and then do a quick spin to concentrate the liquid at the bottom. Speed is less than 5000×g.
5. Store the plasmid at -20 ℃.
6. The concentration of plasmid re-measurement sometimes differs from the nominal value, which may be due to the position of the lyophilized plasmid in the tube, the efficiency of the re-dissolution, the measurement bias, and adsorption on the wall of the tube, therefore, it is recommended to transform and extract the plasmid before using it
General Plasmid Transform Protocol
1. Take one 100μl of the competent cells and thaw it on ice for 10min, add 2μl of plasmid, then ice bath for 30min, then heat-shock it at 42℃ for 60s, do not stir, and then ice bath for 2min.
2. Add 900μl of LB liquid medium without antibiotics, and incubate at 37℃ for 45min (30℃ for 1-1.5 hours) with 180rpm shaking.
3. Centrifuge at 6000rpm for 5min, leave only 100μl of supernatant to resuspend the bacterial precipitate and spread it onto the target plasmid-resistant LB plate.
4. Invert the plate and incubate at 37℃ for 14h, or at 30℃ for 20h.
5. Pick a single colony into LB liquid medium, add the corresponding antibiotics, incubate at 220rpm for 14h, and extract the plasmid according to the experimental needs and the instructions of the plasmid extraction kit.
References
- Heinze, S., Kornberger, P., Grätz, C. et al. Transmating: conjugative transfer of a new broad host range expression vector to various Bacillus species using a single protocol. BMC Microbiol 18, 56 (2018). https://doi.org/10.1186/s12866-018-1198-4
pBACOV vector (Cat. No.: V009316) Sequence
LOCUS 40924_5654 5396 bp DNA circular SYN 17-DEC-2018
DEFINITION Shuttle vector pBACOV, complete sequence.
ACCESSION .
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 5396)
AUTHORS Heinze S, Kornberger P, Graetz C, Schwarz WH, Zverlov VV, Liebl W.
TITLE Conjugative transfer of a new broad host range expression vector to
various Bacillus species using a single protocol
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 5396)
AUTHORS Heinze S, Kornberger P, Graetz C, Schwarz WH, Zverlov VV, Liebl W.
TITLE Direct Submission
JOURNAL Submitted (01-DEC-2017) Department for Microbiology, Technical
University of Munich, Emil-Ramann-Str. 4, Freising, Bavaria 85354,
Germany
REFERENCE 3 (bases 1 to 5396)
TITLE Direct Submission
REFERENCE 4 (bases 1 to 5396)
AUTHORS .
TITLE Direct Submission
COMMENT SGRef: number: 1; type: "Journal Article"; journalName:
"Unpublished"
COMMENT SGRef: number: 2; type: "Journal Article"; journalName: "Submitted
(01-DEC-2017) Department for Microbiology, Technical University of
Munich, Emil-Ramann-Str. 4, Freising, Bavaria 85354, Germany"
COMMENT SGRef: number: 3; type: "Journal Article"
COMMENT ##Assembly-Data-START##
Sequencing Technology :: Sanger dideoxy sequencing
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..5396
/mol_type="other DNA"
/organism="synthetic DNA construct"
rep_origin complement(79..667)
/direction=LEFT
/label=ori
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
CDS complement(841..1698)
/label=AmpR
/note="beta-lactamase"
promoter complement(1699..1803)
/label=AmpR promoter
CDS complement(1832..2116)
/codon_start=1
/gene="traJ"
/product="TraJ"
/label=traJ
/protein_id="AWI97856.1"
/translation="MADETKPTRKGSPPIKVYCLPDERRAIEEKAAAAGMSLSAYLLAV
GQGYKITGVVDYEHVRELARINGDLGQQKAHYVNHHPNQVFWGRGAVKH"
gene complement(1832..2116)
/gene="traJ"
/label=traJ
/note="required for conjugation"
oriT complement(2149..2258)
/direction=LEFT
/label=oriT
/note="incP origin of transfer"
CDS complement(2515..3276)
/codon_start=1
/gene="kanR"
/product="kanamycin resistance protein"
/label=kanR
/note="KanR"
/protein_id="AWI97857.1"
/translation="MNGPIIMTREERMKIVHEIKERILDKYGDDVKAIGVYGSLGRQTD
GPYSDIEMMCVMSTEEAEFSHEWTTGEWKVEVNFDSEEILLDYASQVESDWPLTHGQFF
SILPIYDSGGYLEKVYQTAKSVEAQTFHDAICALIVEELFEYAGKWRNIRVQGPTTFLP
SLTVQVAMAGAMLIGLHHRICYTTSASVLTEAVKQSDLPSGYDHLCQFVMSGQLSDSEK
LLESLENFWNGIQEWTERHGYIVDVSKRIPF"
gene complement(2515..3276)
/gene="kanR"
/label=kanR
/note="for selection in Bacillus"
CDS complement(3448..4449)
/label=repB
/note="RepB replication protein"
regulatory 4866..5031
/label=aprE promoter from Bacillus subtilis
/note="aprE promoter from Bacillus subtilis"
/regulatory_class="promoter"
regulatory 4960..4969
/regulatory_class="minus_35_signal"
regulatory 4987..4992
/regulatory_class="minus_10_signal"
regulatory 5042..5046
/regulatory_class="ribosome_binding_site"
misc_feature 5057..5143
/note="aprE signal peptide from Bacillus subtilis for
secretory protein expression; aprE-SP"
misc_feature 5156..5215
/label=multiple cloning site (MCS)
/note="multiple cloning site (MCS)"
CDS 5216..5233
/label=6xHis
/note="6xHis affinity tag"