Basic Vector Information
- Vector Name:
- pBS 35S YFP-attR
- Antibiotic Resistance:
- Ampicillin
- Length:
- 6565 bp
- Type:
- Cloning vector
- Replication origin:
- ori
- Host:
- Plants
- Source/Author:
- Subramanian C, Woo J, Cai X, Xu X, Servick S, Johnson CH, Nebenfuhr A, von Arnim AG.
- Promoter:
- CaMV 35S (enhanced)
pBS 35S YFP-attR vector Map
pBS 35S YFP-attR vector Sequence
LOCUS 40924_7101 6565 bp DNA circular SYN 17-DEC-2018
DEFINITION Cloning vector pBS 35S YFP-attR, complete sequence.
ACCESSION .
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 6565)
AUTHORS Subramanian C, Woo J, Cai X, Xu X, Servick S, Johnson CH, Nebenfuhr
A, von Arnim AG.
TITLE A suite of tools and application notes for in vivo protein
interaction assays using bioluminescence resonance energy transfer
(BRET)
JOURNAL Plant J. 48 (1), 138-152 (2006)
PUBMED 16925598
REFERENCE 2 (bases 1 to 6565)
AUTHORS von Arnim AG, Subramanian C.
TITLE Direct Submission
JOURNAL Submitted (30-MAR-2005) BCMB, University of Tennessee Knoxville,
1406 Circle Drive, Hesler Biology Bldg 618, Knoxville, TN 37996, USA
REFERENCE 3 (bases 1 to 6565)
TITLE Direct Submission
REFERENCE 4 (bases 1 to 6565)
AUTHORS .
TITLE Direct Submission
COMMENT SGRef: number: 1; type: "Journal Article"; journalName: "Plant J.";
date: "2006"; volume: "48"; issue: "1"; pages: "138-152"
COMMENT SGRef: number: 2; type: "Journal Article"; journalName: "Submitted
(30-MAR-2005) BCMB, University of Tennessee Knoxville, 1406 Circle
Drive, Hesler Biology Bldg 618, Knoxville, TN 37996, USA"
COMMENT SGRef: number: 3; type: "Journal Article"
FEATURES Location/Qualifiers
source 1..6565
/mol_type="other DNA"
/organism="synthetic DNA construct"
rep_origin complement(6..461)
/direction=LEFT
/label=f1 ori
/note="f1 bacteriophage origin of replication; arrow
indicates direction of (+) strand synthesis"
primer_bind 603..619
/label=M13 fwd
/note="common sequencing primer, one of multiple similar
variants"
promoter 626..644
/label=T7 promoter
/note="promoter for bacteriophage T7 RNA polymerase"
primer_bind 669..685
/label=KS primer
/note="common sequencing primer, one of multiple similar
variants"
promoter 789..1460
/label=CaMV 35S promoter (enhanced)
/note="cauliflower mosaic virus 35S promoter with a
duplicated enhancer region"
regulatory 1460..1602
/note="translational enhancer; 5' UTR from tobacco etch
virus"
/regulatory_class="enhancer"
CDS 1610..2326
/label=EYFP
/note="enhanced YFP"
protein_bind 2333..2457
/label=attR1
/note="recombination site for the Gateway(R) LR reaction"
promoter 2482..2512
/label=lac UV5 promoter
/note="E. coli lac promoter with an 'up' mutation"
CDS 2566..3222
/label=CmR
/note="chloramphenicol acetyltransferase"
CDS 3567..3869
/label=ccdB
/note="CcdB, a bacterial toxin that poisons DNA gyrase"
protein_bind complement(3913..4037)
/label=attR2
/note="recombination site for the Gateway(R) LR reaction"
regulatory 4108..4318
/label=35S cauliflower mosaic virus terminator
/note="35S cauliflower mosaic virus terminator"
/regulatory_class="terminator"
promoter complement(4380..4398)
/label=T3 promoter
/note="promoter for bacteriophage T3 RNA polymerase"
primer_bind complement(4419..4435)
/label=M13 rev
/note="common sequencing primer, one of multiple similar
variants"
protein_bind complement(4443..4459)
/label=lac operator
/note="The lac repressor binds to the lac operator to
inhibit transcription in E. coli. This inhibition can be
relieved by adding lactose or
isopropyl-beta-D-thiogalactopyranoside (IPTG)."
promoter complement(4467..4497)
/label=lac promoter
/note="promoter for the E. coli lac operon"
protein_bind complement(4512..4533)
/label=CAP binding site
/note="CAP binding activates transcription in the presence
of cAMP."
rep_origin complement(4821..5409)
/direction=LEFT
/label=ori
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
CDS complement(5583..6440)
/label=AmpR
/note="beta-lactamase"
promoter complement(6441..6545)
/label=AmpR promoter
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