Basic Vector Information
- Vector Name:
- pBMTL-6
- Length:
- 5922 bp
- Type:
- Cloning vector
- Replication origin:
- pBBR1 oriV
- Source/Author:
- Lynch MD, Gill RT.
pBMTL-6 vector Map
pBMTL-6 vector Sequence
LOCUS 40924_6956 5922 bp DNA circular SYN 17-DEC-2018
DEFINITION Cloning vector pBMTL-6, complete sequence.
ACCESSION .
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 5922)
AUTHORS Lynch MD, Gill RT.
TITLE Broad host range vectors for stable genomic library construction
JOURNAL Biotechnol. Bioeng. 94 (1), 151-158 (2006)
PUBMED 16496398
REFERENCE 2 (bases 1 to 5922)
AUTHORS Lynch MD, Gill RT.
TITLE Direct Submission
JOURNAL Submitted (10-JUN-2005) Chemical and Biological Engineering,
University of Colorado @ Boulder, ECCH 111, Campus Box 424, Boulder,
CO 80309, USA
REFERENCE 3 (bases 1 to 5922)
TITLE Direct Submission
REFERENCE 4 (bases 1 to 5922)
AUTHORS .
TITLE Direct Submission
COMMENT SGRef: number: 1; type: "Journal Article"; journalName: "Biotechnol.
Bioeng."; date: "2006"; volume: "94"; issue: "1"; pages: "151-158"
COMMENT SGRef: number: 2; type: "Journal Article"; journalName: "Submitted
(10-JUN-2005) Chemical and Biological Engineering, University of
Colorado @ Boulder, ECCH 111, Campus Box 424, Boulder, CO 80309,
USA"
COMMENT SGRef: number: 3; type: "Journal Article"
FEATURES Location/Qualifiers
source 1..5922
/mol_type="other DNA"
/organism="synthetic DNA construct"
terminator complement(60..96)
/label=soxR terminator
/note="bidirectional E. coli soxR transcription terminator"
CDS complement(104..1123)
/codon_start=1
/gene="mob"
/product="Mob"
/label=mob
/note="required for mobilization"
/protein_id="AAZ83202.1"
/translation="MAAYAIMRCKKLAKMGNVAASLKHAYRERETPNADASRTPENEHW
AASSTDEAMGRLRELLPEKRRKDAVLAVEYVMTASPEWWKSASQEQQAAFFEKAHKWLA
DKYGADRIVTASIHRDETSPHMTAFVVPLTQDGRLSAKEFIGNKAQMTRDQTTFAAAVA
DLGLQRGIEGSKARHTRIQAFYEALERPPVGHVTISPQAVEPRAYAPQGLAEKLGISKR
VETPEAVADRLTKAVRQGYEPALQAAAGAREMRKKADQAQETARDLRERLKPVLDALGP
LNRDMQAKAAAIIKAVGEKLLTEQREVQRQKQAQRQQERGRAHFPEKCHLTSKKPLLS"
gene complement(104..1123)
/gene="mob"
/label=mob
/note="derived from pBBR1MCS in GenBank Accession Number
U02374"
rep_origin 1347..2116
/label=pBBR1 oriV
/note="replication origin of the broad-host-range plasmid
pBBR1 from Bordetella bronchiseptica; requires the pBBR1
Rep protein for replication"
CDS 2117..2776
/codon_start=1
/label=pBBR1 Rep
/note="replication protein for the broad-host-range plasmid
pBBR1 from Bordetella bronchiseptica"
/translation="MATQSREIGIQAKNKPGHWVQTERKAHEAWAGLIARKPTAAMLLH
HLVAQMGHQNAVVVSQKTLSKLIGRSLRTVQYAVKDLVAERWISVVKLNGPGTVSAYVV
NDRVAWGQPRDQLRLSVFSAAVVVDHDDQDESLLGHGDLRRIPTLYPGEQQLPTGPGEE
PPSQPGIPGMEPDLPALTETEEWERRGQQRLPMPDEPCFLDDGEPLEPPTRVTLPRR"
CDS 2876..3649
/codon_start=1
/gene="kilA"
/product="KilA"
/label=kilA
/note="involved in tellurite resistance"
/protein_id="AAZ83204.1"
/translation="MEEQSVNMARLKGEVLPALFASPATIGEYGAGIDGADSLNELSNL
MEHGAVAALADKISQIVAKLADADPRKIAEKPTWFEKMLGREVERQVRYQVARKTLDQL
LDEAEGVAQRVRDTLRALDDMLNTHEAEVDRLRAYIQAGREFLDENPEAGAAKAGVIEF
DKPRERFARKLANLATLMASHEMSVTQMKLTRAQAVDMLDRFSETASVLVPVWRQHTLA
LITTKNMNPAMVAEAAKAHQALMRSLSQSLEGINQ"
gene 2876..3649
/gene="kilA"
/label=kilA
CDS 3667..4803
/codon_start=1
/gene="telA"
/product="TelA"
/label=telA
/note="involved in tellurite resistance"
/protein_id="AAZ83205.1"
/translation="MNALKTTHDAKAPIVAFDMTPATLRELGLQESDVPEVHAVAQRIE
VGSPQTVAEFGRDVAEHTSRYADSLLDQVRNSDLDEAGEKLTQVVAKARSLNVGPLSDN
RSRLPLIGPLIDRFRVRSTGFMARFDTTREQIEHLVSEVQTTQQGIAQRNASLDEMFAA
VREEHRLLGVHIAAGKVRLAELREQAEGLRGNVGNDPGRVQELADLDAMVANLDKRIGD
LIALQHSAMQSLPTIRMIQANNQMLVDKFHTIREITVPAWKRQFMLALSLNEQKNAVEL
ATAIDDTTNDLMKRNAALLHRTSVETAKENQRLVIDVDTLKQVQTTLIKTVEDVIRIQQ
EGVQKRKDAEKQIAAMRGDLQAKLTRQPVRELAQQESV"
gene 3667..4803
/gene="telA"
/label=telA
CDS 4800..5753
/codon_start=1
/gene="telB"
/product="TelB"
/label=telB
/note="involved in tellurite resistance"
/protein_id="AAZ83206.1"
/translation="MNATNTDVFAQVGGLEARGAKMKKRGTRFLIAALAVLAIAGIGAV
TGWAISPSATPGSIDVPQVLASTFSDQVPGSEGGGLGGGLPFTSAVGAFTDFMAGPAIF
TLGILGIVVAGAVLVFGGEFCGFVRSVCMMVIAVSMIFVSSNLVKGILGGDHDAGPAEP
SPRARFMAAVEAKDFARVQELIEARGAKSAADYVLAQLAVAEGLDRKPGARVVVGKAAG
SMAMPPAALGFTPRGEAAYAIERSAYGEPRSSIAKQYQQEWNRKAATWWAMAGVAGIIG
AILAAAATGFVGLAVSIRNRVKRVRDLLVMEPGAEP"
gene 4800..5753
/gene="telB"
/label=telB
terminator complement(5767..5798)
/label=tonB terminator
/note="bidirectional E. coli tonB-P14 transcription
terminator"
promoter 5845..5875
/label=lac promoter
/note="promoter for the E. coli lac operon"
protein_bind 5883..5899
/label=lac operator
/note="The lac repressor binds to the lac operator to
inhibit transcription in E. coli. This inhibition can be
relieved by adding lactose or
isopropyl-beta-D-thiogalactopyranoside (IPTG)."
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