Basic Vector Information
- Vector Name:
- GAANTRY P donor nptII
- Antibiotic Resistance:
- Ampicillin
- Length:
- 8526 bp
- Type:
- Cloning vector
- Replication origin:
- ori
- Source/Author:
- Collier R, Thomson JG, Thilmony R.
- Promoter:
- sacB
GAANTRY P donor nptII vector Map
GAANTRY P donor nptII vector Sequence
LOCUS 40924_984 8526 bp DNA circular SYN 17-DEC-2018
DEFINITION Cloning vector GAANTRY P donor nptII, complete sequence.
ACCESSION .
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 8526)
AUTHORS Collier R, Thomson JG, Thilmony R.
TITLE GAANTRY, a versatile and robust Agrobacterium-based gene stacking
system generates high quality transgenic plants
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 8526)
AUTHORS Thilmony R.
TITLE Direct Submission
JOURNAL Submitted (15-DEC-2017) Crop Improvement and Genetics research Unit,
USDA-ARS-WRRC, 800 Buchanan Street, Albany, CA 94710-1105, USA
REFERENCE 3 (bases 1 to 8526)
TITLE Direct Submission
REFERENCE 4 (bases 1 to 8526)
AUTHORS .
TITLE Direct Submission
COMMENT SGRef: number: 1; type: "Journal Article"; journalName:
"Unpublished"
COMMENT SGRef: number: 2; type: "Journal Article"; journalName: "Submitted
(15-DEC-2017) Crop Improvement and Genetics research Unit,
USDA-ARS-WRRC, 800 Buchanan Street, Albany, CA 94710-1105, USA"
COMMENT SGRef: number: 3; type: "Journal Article"
COMMENT ##Assembly-Data-START##
Sequencing Technology :: Sanger dideoxy sequencing
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..8526
/mol_type="other DNA"
/organism="synthetic DNA construct"
regulatory 1..811
/label=Arabidopsis ubiquitin 10 promoter and 5' intron
/note="Arabidopsis ubiquitin 10 promoter and 5' intron"
/regulatory_class="promoter"
CDS 827..1615
/label=NeoR/KanR
/note="aminoglycoside phosphotransferase"
terminator 1679..1931
/label=NOS terminator
/note="nopaline synthase terminator and poly(A) signal"
misc_feature 2086..2141
/label=A118 attP
/note="A118 attP"
misc_feature 2178..2202
/label=RB T-DNA repeat
/note="right border repeat from nopaline C58 T-DNA"
CDS 2534..3325
/label=KanR
/note="aminoglycoside phosphotransferase"
misc_feature 3520..3625
/label=ParA MRS
/note="ParA MRS"
primer_bind complement(3648..3664)
/label=M13 rev
/note="common sequencing primer, one of multiple similar
variants"
protein_bind complement(3672..3688)
/label=lac operator
/note="The lac repressor binds to the lac operator to
inhibit transcription in E. coli. This inhibition can be
relieved by adding lactose or
isopropyl-beta-D-thiogalactopyranoside (IPTG)."
promoter complement(3696..3726)
/label=lac promoter
/note="promoter for the E. coli lac operon"
protein_bind complement(3741..3762)
/label=CAP binding site
/note="CAP binding activates transcription in the presence
of cAMP."
promoter 3995..4440
/label=sacB promoter
/note="sacB promoter and control region"
CDS 4441..5859
/label=SacB
/note="secreted levansucrase that renders bacterial growth
sensitive to sucrose"
rep_origin complement(5960..6548)
/direction=LEFT
/label=ori
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
CDS complement(6722..7579)
/label=AmpR
/note="beta-lactamase"
promoter complement(7580..7684)
/label=AmpR promoter
rep_origin complement(7710..8165)
/direction=LEFT
/label=f1 ori
/note="f1 bacteriophage origin of replication; arrow
indicates direction of (+) strand synthesis"
primer_bind 8307..8323
/label=M13 fwd
/note="common sequencing primer, one of multiple similar
variants"
misc_feature 8332..8396
/label=TP901 attP
/note="TP901 attP"
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