Basic Vector Information
| Basic Vector Information | |||
|---|---|---|---|
| Vector Name | DBH-FLPo | Antibiotic Resistance | Ampicillin |
| Length | 7385 bp | Type | Cloning vector |
| Source | Sun JJ, Ray R. | ||
DBH-FLPo vector Vector Map
Plasmid Resuspension Protocol:
1. Centrifuge at 5,000×g for 5 min.
2. Carefully open the tube and add 20 μl of sterile water to dissolve the DNA.
3. Close the tube and incubate for 10 minutes at room temperature.
4. Briefly vortex the tube and then do a quick spin to concentrate the liquid at the bottom. Speed is less than 5000×g.
5.Store the plasmid at -20 ℃.
DBH-FLPo vector Sequence
LOCUS Exported 7385 bp ds-DNA circular SYN 17-DEC-2018
DEFINITION Cloning vector DBH-FLPo, complete sequence.
ACCESSION KX151728
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 7385)
AUTHORS Sun JJ, Ray R.
TITLE Generation of Two Noradrenergic-Specific
Dopamine-Beta-Hydroxylase-FLPo Knock-In Mice Using
CRISPR/Cas9-Mediated Targeting in Embryonic Stem Cells
JOURNAL PLoS ONE 11 (7), E0159474 (2016)
PUBMED 27441631
REFERENCE 2 (bases 1 to 7385)
AUTHORS Sun JJ, Ray R.
TITLE Direct Submission
JOURNAL Submitted (27-APR-2016) Neuroscience, Baylor College of Medicine,
One Baylor Plaza Room T707, Houston, TX 77030, USA
REFERENCE 3 (bases 1 to 7385)
AUTHORS .
TITLE Direct Submission
FEATURES Location/Qualifiers
source 1..7385
/organism="Cloning vector DBH-FLPo"
/mol_type="other DNA"
/db_xref="taxon:1883127"
rep_origin 1..827
/label=p15a origin
/note="p15a origin"
rep_origin 18..562
/direction=RIGHT
/label=p15A ori
/note="Plasmids containing the medium-copy-number p15A
origin of replication can be propagated in E. coli cells
that contain a second plasmid with the ColE1 origin."
misc_feature 842..1838
/label=5' homology arm
/note="5' homology arm"
regulatory 1836..1845
/regulatory_class="other"
/note="vertebrate consensus sequence for strong initiation
of translation (Kozak, 1987)"
CDS 1842..3140
/codon_start=1
/product="FLPo"
/label=FLPo
/protein_id="ANW61888.1"
/translation="MAPKKKRKVMSQFDILCKTPPKVLVRQFVERFERPSGEKIASCAA
ELTYLCWMITHNGTAIKRATFMSYNTIISNSLSFDIVNKSLQFKYKTQKATILEASLKK
LIPAWEFTIIPYNGQKHQSDITDIVSSLQLQFESSEEADKGNSHSKKMLKALLSEGESI
WEITEKILNSFEYTSRFTKTKTLYQFLFLATFINCGRFSDIKNVDPKSFKLVQNKYLGV
IIQCLVTETKTSVSRHIYFFSARGRIDPLVYLDEFLRNSEPVLKRVNRTGNSSSNKQEY
QLLKDNLVRSYNKALKKNAPYPIFAIKNGPKSHIGRHLMTSFLSMKGLTELTNVVGNWS
DKRASAVARTTYTHQITAIPDHYFALVSRYYAYDPISKEMIALKDETNPIEEWQHIEQL
KGSAEGSIRYPAWNGIISQEVLDYLSSYINRRI"
regulatory 3168..3395
/regulatory_class="other"
/note="bghpA"
polyA_signal 3171..3395
/label=bGH poly(A) signal
/note="bovine growth hormone polyadenylation signal"
misc_feature 3403..3436
/label=Lox2722
/note="Lox2722"
protein_bind complement(3403..3436)
/label=lox2272
/bound_moiety="Cre recombinase"
/note="Cre-mediated recombination occurs in the 8-bp core
sequence (GGATACTT). lox2272 sites are compatible with each
other, but incompatible with loxP or loxN sites."
regulatory 3437..3951
/regulatory_class="promoter"
/note="PGK"
promoter 3443..3942
/label=PGK promoter
/note="mouse phosphoglycerate kinase 1 promoter"
regulatory 3954..4019
/regulatory_class="promoter"
/note="EM7"
promoter 3954..4001
/label=EM7 promoter
/note="synthetic bacterial promoter "
CDS 4020..4823
/codon_start=1
/product="NeoR"
/label=NeoR
/protein_id="ANW61889.1"
/translation="MGSAIEQDGLHAGSPAAWVERLFGYDWAQQTIGCSDAAVFRLSAQ
GRPVLFVKTDLSGALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQD
LLSSHLAPAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDE
EHQGLAPAELFARLKARMPDGDDLVVTHGDACLPNIMVENGRFSGFIDCGRLGVADRYQ
DIALATRDIAEELGGEWADRFLVLYGIAAPDSQRIAFYRLLDEFF"
regulatory 4837..5139
/regulatory_class="other"
/note="bghpA"
polyA_signal 4861..5085
/label=bGH poly(A) signal
/note="bovine growth hormone polyadenylation signal"
misc_feature 5140..5173
/label=Lox2722
/note="Lox2722"
protein_bind complement(5140..5173)
/label=lox2272
/bound_moiety="Cre recombinase"
/note="Cre-mediated recombination occurs in the 8-bp core
sequence (GGATACTT). lox2272 sites are compatible with each
other, but incompatible with loxP or loxN sites."
misc_feature 5198..6197
/label=3' homology arm with deletion
/note="3' homology arm with deletion"
promoter 6273..6377
/gene="bla"
/label=AmpR promoter
CDS 6378..7238
/codon_start=1
/product="AmpR"
/label=AmpR
/protein_id="ANW61887.1"
/translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI
ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVEYS
PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW
EPELNEAIPNDERDTTMPAAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA
LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS
LIKHW"
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