Basic Vector Information
- Vector Name:
- pSilencer 4.1-CMV puro
- Antibiotic Resistance:
- Ampicillin
- Length:
- 4781 bp
- Type:
- RNAi
- Replication origin:
- ori
- Source/Author:
- Thermo Fisher Scientific
- Selection Marker:
- Puromycin
- Copy Number:
- High copy number
- Promoter:
- CMV
- Cloning Method:
- Enzyme Cut
- Expression Method:
- Transient
pSilencer 4.1-CMV puro vector Map
pSilencer 4.1-CMV puro vector Sequence
LOCUS 40924_40372 4781 bp DNA circular SYN 08-APR-2021
DEFINITION synthetic circular DNA.
ACCESSION .
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 4781)
TITLE Direct Submission
REFERENCE 2 (bases 1 to 4781)
AUTHORS .
TITLE Direct Submission
COMMENT SGRef: number: 1; type: "Journal Article"
FEATURES Location/Qualifiers
source 1..4781
/mol_type="other DNA"
/organism="synthetic DNA construct"
primer_bind 379..395
/label=M13 fwd
/note="common sequencing primer, one of multiple similar
variants"
promoter complement(536..739)
/label=CMV promoter
/note="human cytomegalovirus (CMV) immediate early
promoter"
enhancer complement(740..1043)
/label=CMV enhancer
/note="human cytomegalovirus immediate early enhancer"
promoter complement(1165..1183)
/label=T7 promoter
/note="promoter for bacteriophage T7 RNA polymerase"
promoter complement(1195..1213)
/label=SP6 promoter
/note="promoter for bacteriophage SP6 RNA polymerase"
primer_bind complement(1233..1249)
/label=M13 rev
/note="common sequencing primer, one of multiple similar
variants"
protein_bind complement(1257..1273)
/label=lac operator
/note="The lac repressor binds to the lac operator to
inhibit transcription in E. coli. This inhibition can be
relieved by adding lactose or
isopropyl-beta-D-thiogalactopyranoside (IPTG)."
promoter complement(1281..1311)
/label=lac promoter
/note="promoter for the E. coli lac operon"
protein_bind complement(1326..1347)
/label=CAP binding site
/note="CAP binding activates transcription in the presence
of cAMP."
rep_origin complement(1635..2223)
/direction=LEFT
/label=ori
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
CDS complement(2397..3254)
/codon_start=1
/label=AmpR
/note="beta-lactamase"
/translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI
ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYS
PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW
EPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA
LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS
LIKHW"
promoter complement(3255..3359)
/label=AmpR promoter
polyA_signal complement(3447..3528)
/label=SV40 poly(A) signal
/note="SV40 polyadenylation signal"
CDS complement(3761..4357)
/codon_start=1
/label=PuroR
/note="puromycin N-acetyltransferase"
/translation="MTEYKPTVRLATRDDVPRAVRTLAAAFADYPATRHTVDPDRHIER
VTELQELFLTRVGLDIGKVWVADDGAAVAVWTTPESVEAGAVFAEIGPRMAELSGSRLA
AQQQMEGLLAPHRPKEPAWFLATVGVSPDHQGKGLGSAVVLPGVEAAERAGVPAFLETS
APRNLPFYERLGFTVTADVEVPEGPRTWCMTRKPGA"
promoter complement(4454..4770)
/label=SV40 promoter
/note="SV40 enhancer and early promoter"
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