Basic Vector Information
- Vector Name:
- pMSCV PIG (Puro IRES GFP empty vector)
- Antibiotic Resistance:
- Ampicillin
- Length:
- 7627 bp
- Type:
- Mammalian Expression, Retroviral
- Replication origin:
- ori
- Selection Marker:
- Puromycin
- Copy Number:
- High Copy
- Promoter:
- MSCV
- Cloning Method:
- Restriction Enzyme
- 5' Primer:
- pBABE 5
- 3' Primer:
- EGFP-N
pMSCV PIG (Puro IRES GFP empty vector) vector Vector Map
Plasmid Resuspension Protocol:
1. Centrifuge at 5,000×g for 5 min.
2. Carefully open the tube and add 20 μl of sterile water to dissolve the DNA.
3. Close the tube and incubate for 10 minutes at room temperature.
4. Briefly vortex the tube and then do a quick spin to concentrate the liquid at the bottom. Speed is less than 5000×g.
5.Store the plasmid at -20 ℃.
pMSCV PIG (Puro IRES GFP empty vector) vector Sequence
LOCUS 40924_32380 7627 bp DNA circular SYN 16-AUG-2021
DEFINITION Retroviral backbone for cloning and gene expression. Select with
puromycin or GFP..
ACCESSION .
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 7627)
AUTHORS Mayr C, Bartel DP
TITLE Widespread shortening of 3'UTRs by alternative cleavage and
polyadenylation activates oncogenes in cancer cells.
JOURNAL Cell. 2009 Aug 21. 138(4):673-84.
PUBMED 19703394
REFERENCE 2 (bases 1 to 7627)
TITLE Direct Submission
REFERENCE 3 (bases 1 to 7627)
AUTHORS .
TITLE Direct Submission
COMMENT SGRef: number: 1; type: "Journal Article"; journalName: "Cell. 2009
Aug 21. 138(4):673-84."
COMMENT SGRef: number: 2; type: "Journal Article"
FEATURES Location/Qualifiers
source 1..7627
/mol_type="other DNA"
/organism="synthetic DNA construct"
protein_bind complement(676..692)
/label=lac operator
/note="The lac repressor binds to the lac operator to
inhibit transcription in E. coli. This inhibition can be
relieved by adding lactose or
isopropyl-beta-D-thiogalactopyranoside (IPTG)."
promoter complement(700..730)
/label=lac promoter
/note="promoter for the E. coli lac operon"
protein_bind complement(745..766)
/label=CAP binding site
/note="CAP binding activates transcription in the presence
of cAMP."
primer_bind complement(883..900)
/label=L4440
/note="L4440 vector, forward primer"
rep_origin complement(1054..1642)
/direction=LEFT
/label=ori
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
CDS complement(1816..2673)
/codon_start=1
/label=AmpR
/note="beta-lactamase"
/translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI
ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYS
PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW
EPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA
LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS
LIKHW"
promoter complement(2674..2778)
/label=AmpR promoter
primer_bind 2846..2864
/label=pBRforEco
/note="pBR322 vectors, upsteam of EcoRI site, forward
primer"
primer_bind complement(2902..2924)
/label=pGEX 3'
/note="pGEX vectors, reverse primer"
primer_bind 3024..3043
/label=pRS-marker
/note="pRS vectors, use to sequence yeast selectable
marker"
primer_bind 3237..3259
/label=M13/pUC Forward
/note="In lacZ gene"
primer_bind 3387..3406
/label=pBRrevBam
/note="pBR322 vectors, tet region, downstream of BamHI,
reverse primer"
LTR 3606..4122
/label=5' LTR
/note="5' long terminal repeat from murine embryonic stem
cell virus"
misc_feature 4186..4527
/label=MESV Psi
/note="packaging signal of murine embryonic stem cell
virus"
CDS 4594..5010
/codon_start=1
/label=gag (truncated)
/note="truncated Moloney murine leukemia virus (MMLV) gag
gene lacking the start codon"
/translation="GQTVTTPLSLTLGHWKDVERIAHNQSVDVKKRRWVTFCSAEWPTF
NVGWPRDGTFNRDLITQVKIKVFSPGPHGHPDQVPYIVTWEALAFDPPPWVKPFVHPKP
PPPLPPSAPSLPLEPPRSTPPRSSLYPALTPSLGA"
promoter 5045..5544
/label=PGK promoter
/note="mouse phosphoglycerate kinase 1 promoter"
CDS 5565..6161
/codon_start=1
/label=PuroR
/note="puromycin N-acetyltransferase"
/translation="MTEYKPTVRLATRDDVPRAVRTLAAAFADYPATRHTVDPDRHIER
VTELQELFLTRVGLDIGKVWVADDGAAVAVWTTPESVEAGAVFAEIGPRMAELSGSRLA
AQQQMEGLLAPHRPKEPAWFLATVGVSPDHQGKGLGSAVVLPGVEAAERAGVPAFLETS
APRNLPFYERLGFTVTADVEVPEGPRTWCMTRKPGA"
misc_feature 6229..6805
/label=IRES2
/note="internal ribosome entry site (IRES) of the
encephalomyocarditis virus (EMCV)"
CDS 6806..7522
/codon_start=1
/label=EGFP
/note="enhanced GFP"
/translation="MVSKGEELFTGVVPILVELDGDVNGHKFSVSGEGEGDATYGKLTL
KFICTTGKLPVPWPTLVTTLTYGVQCFSRYPDHMKQHDFFKSAMPEGYVQERTIFFKDD
GNYKTRAEVKFEGDTLVNRIELKGIDFKEDGNILGHKLEYNYNSHNVYIMADKQKNGIK
ANFKIRHNIEDGSVQLADHYQQNTPIGDGPVLLPDNHYLSTQSALSKDPNEKRDHMVLL
EFVTAAGITLGMDELYK"
LTR 7627
/label=3' LTR
/note="3' long terminal repeat from murine embryonic stem
cell virus"
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