Basic Vector Information
- Vector Name:
- ArcLight-A242
- Antibiotic Resistance:
- Ampicillin
- Length:
- 7143 bp
- Type:
- Mammalian Expression
- Replication origin:
- ori
- Selection Marker:
- Hygromycin
- Copy Number:
- High Copy
- Promoter:
- sCMV
- Cloning Method:
- Restriction Enzyme
- 5' Primer:
- GACGTAAATGGGCGGTAGGCGTG
- 3' Primer:
- TTAAAAAACCTCCCACACCTC
ArcLight-A242 vector Vector Map
Plasmid Resuspension Protocol:
1. Centrifuge at 5,000×g for 5 min.
2. Carefully open the tube and add 20 μl of sterile water to dissolve the DNA.
3. Close the tube and incubate for 10 minutes at room temperature.
4. Briefly vortex the tube and then do a quick spin to concentrate the liquid at the bottom. Speed is less than 5000×g.
5.Store the plasmid at -20 ℃.
ArcLight-A242 vector Sequence
LOCUS 40924_290 7143 bp DNA circular SYN 13-MAY-2021
DEFINITION synthetic circular DNA.
ACCESSION .
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 7143)
AUTHORS Jin L, Han Z, Platisa J, Wooltorton JR, Cohen LB, Pieribone VA
TITLE Single action potentials and subthreshold electrical events imaged
in neurons with a fluorescent protein voltage probe.
JOURNAL Neuron. 2012 Sep 6;75(5):779-85.
PUBMED 22958819
REFERENCE 2 (bases 1 to 7143)
TITLE Direct Submission
REFERENCE 3 (bases 1 to 7143)
AUTHORS .
TITLE Direct Submission
COMMENT SGRef: number: 1; type: "Journal Article"; journalName: "Neuron.";
date: "2012-09-6"; volume: "75(5)"; pages: "779-85"
COMMENT SGRef: number: 2; type: "Journal Article"
FEATURES Location/Qualifiers
source 1..7143
/mol_type="other DNA"
/organism="synthetic DNA construct"
promoter 35..53
/label=SP6 promoter
/note="promoter for bacteriophage SP6 RNA polymerase"
CDS 799..1512
/codon_start=1
/label=superecliptic pHluorin
/note="pH-sensitive mutant of green fluorescent protein (Ng
et al., 2002)"
/translation="MSKGEELFTGVVPILVELDGDVNGHKFSVSGEGEGDATYGKLTLK
FICTTGKLPVPWPTLVTTLTYGVQCFSRYPDHMKRHDFFKSAMPEGYVQERTIFFKDDG
NYKTRAEVKFEGDTLVNRIELKGIDFKEDGNILGHKLEYNYNDHQVYIMADKQKNGIKA
NFKIRHNIEDGGVQLADHYQQNTPIGDGPVLLPDNHYLFTTSTLSKDPNEKRDHMVLLE
FVTADGITHGMDELYK"
promoter complement(1523..1540)
/label=T7 promoter
/note="promoter for bacteriophage T7 RNA polymerase"
polyA_signal complement(1545..1679)
/label=SV40 poly(A) signal
/note="SV40 polyadenylation signal"
promoter 1789..2118
/label=SV40 promoter
/note="SV40 enhancer and early promoter"
CDS 2167..3189
/codon_start=1
/label=HygR
/note="aminoglycoside phosphotransferase from E. coli"
/translation="MKKPELTATSVEKFLIEKFDSVSDLMQLSEGEESRAFSFDVGGRG
YVLRVNSCADGFYKDRYVYRHFASAALPIPEVLDIGEFSESLTYCISRRAQGVTLQDLP
ETELPAVLQPVAEAMDAIAAADLSQTSGFGPFGPQGIGQYTTWRDFICAIADPHVYHWQ
TVMDDTVSASVAQALDELMLWAEDCPEVRHLVHADFGSNNVLTDNGRITAVIDWSEAMF
GDSQYEVANIFFWRPWLACMEQQTRYFERRHPELAGSPRLRAYMLRIGLDQLYQSLVDG
NFDDAAWAQGRCDAIVRSGAGTVGRTQIARRSAAVWTDGCVEVLADSGNRRPSTRPRAK
E"
polyA_signal 3322..3455
/label=SV40 poly(A) signal
/note="SV40 polyadenylation signal"
primer_bind complement(3481..3497)
/label=M13 rev
/note="common sequencing primer, one of multiple similar
variants"
protein_bind complement(3505..3521)
/label=lac operator
/note="The lac repressor binds to the lac operator to
inhibit transcription in E. coli. This inhibition can be
relieved by adding lactose or
isopropyl-beta-D-thiogalactopyranoside (IPTG)."
promoter complement(3529..3559)
/label=lac promoter
/note="promoter for the E. coli lac operon"
protein_bind complement(3574..3595)
/label=CAP binding site
/note="CAP binding activates transcription in the presence
of cAMP."
primer_bind complement(3712..3729)
/label=L4440
/note="L4440 vector, forward primer"
rep_origin complement(3883..4471)
/direction=LEFT
/label=ori
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
CDS complement(4645..5502)
/codon_start=1
/label=AmpR
/note="beta-lactamase"
/translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI
ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYS
PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW
EPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA
LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS
LIKHW"
promoter complement(5503..5607)
/label=AmpR promoter
rep_origin complement(5633..6088)
/direction=LEFT
/label=f1 ori
/note="f1 bacteriophage origin of replication; arrow
indicates direction of (+) strand synthesis"
promoter 6165..7143
/label=CMV IE94 promoter
/note="enhancer/promoter region of simian cytomegalovirus
major immediate early transcription unit IE94"
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