Basic Vector Information
- Vector Name:
- pT3-U6-shRNA-Negative-Control-EF1a-myr-AKT-HA
- Antibiotic Resistance:
- Ampicillin
- Length:
- 7402 bp
- Type:
- RNA interference
- Replication origin:
- ori
- Host:
- Mammalian cells
- Promoter:
- U6
- 5' Primer:
- U6-F
- Growth Strain(s):
- DH5a
- Growth Temperature:
- 37℃
pT3-U6-shRNA-Negative-Control-EF1a-myr-AKT-HA vector Map
pT3-U6-shRNA-Negative-Control-EF1a-myr-AKT-HA vector Sequence
LOCUS . 7402 bp DNA circular UNK 01-JAN-1980
DEFINITION synthetic circular DNA.
ACCESSION
VERSION
KEYWORDS .
SOURCE .
ORGANISM .
.
FEATURES Location/Qualifiers
promoter 1..1179
/label="EF-1α promoter"
/note="strong constitutive promoter for human elongation
factor EF-1α"
promoter 1196..1214
/label="T7 promoter"
/note="promoter for bacteriophage T7 RNA polymerase"
protein_bind 1293..1317
/label="attB1"
/note="recombination site for the Gateway® BP reaction"
CDS 1338..1358
/label="myr"
/note="N-myristoylation signal from Src kinase (Pellman et
al., 1985; Kaplan et al., 1988)"
CDS 1371..2810
/label="Akt1"
/note="human serine/threonine protein kinase activated by
growth factors"
CDS 2811..2837
/label="HA"
/note="HA (human influenza hemagglutinin) epitope tag"
protein_bind complement(2857..2881)
/label="attB2"
/note="recombination site for the Gateway® BP reaction"
CDS 2934..2975
/label="V5 tag"
/note="epitope tag from simian virus 5"
polyA_signal 3019..3243
/label="bGH poly(A) signal"
/note="bovine growth hormone polyadenylation signal"
protein_bind 3313..3346
/label="loxP"
/note="Cre-mediated recombination occurs in the 8-bp core
sequence (ATGTATGC) (Shaw et al., 2021)."
primer_bind complement(3804..3820)
/label="M13 fwd"
/note="common sequencing primer, one of multiple similar
variants"
promoter 4294..4398
/label="AmpR promoter"
CDS 4399..5256
/label="AmpR"
/note="β-lactamase"
rep_origin 5430..6018
/label="ori"
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
protein_bind 6306..6327
/label="CAP binding site"
/note="CAP binding activates transcription in the presence
of cAMP."
promoter 6342..6372
/label="lac promoter"
/note="promoter for the E. coli lac operon"
protein_bind 6380..6396
/label="lac operator"
/note="The lac repressor binds to the lac operator to
inhibit transcription in E. coli. This inhibition can be
relieved by adding lactose or
isopropyl-β-D-thiogalactopyranoside (IPTG)."
primer_bind 6404..6420
/label="M13 rev"
/note="common sequencing primer, one of multiple similar
variants"
promoter 6890..7130
/label="U6 promoter"
/note="RNA polymerase III promoter for human U6 snRNA"
promoter 7404..8581
/label="EF-1α promoter"
/note="strong constitutive promoter for human elongation
factor EF-1α"
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