Basic Vector Information
- Vector Name:
- pC0046-EF1a-PspCas13b-NES-HIV-CMV-EGFP
- Antibiotic Resistance:
- Ampicillin
- Length:
- 14141 bp
- Type:
- Gene-editing vector
- Replication origin:
- ori
- Host:
- Mammalian cells, Lentivirus
- Promoter:
- EF1a
- 3' Primer:
- WPRE-R
- Growth Strain(s):
- Stbl3
- Growth Temperature:
- 37℃
pC0046-EF1a-PspCas13b-NES-HIV-CMV-EGFP vector Map
pC0046-EF1a-PspCas13b-NES-HIV-CMV-EGFP vector Sequence
LOCUS . 14141 bp DNA circular UNK 01-JAN-1980
DEFINITION synthetic circular DNA.
ACCESSION
VERSION
KEYWORDS .
SOURCE .
ORGANISM .
.
FEATURES Location/Qualifiers
promoter 22..1200
/label="EF-1α promoter"
/note="strong constitutive promoter for human elongation
factor EF-1α"
CDS 4495..4521
/label="NES"
/note="nuclear export signal from the HIV Rev protein
(Fischer et al., 1995)"
CDS 4531..4611
/label="3xHA"
/note="three tandem HA epitope tags"
enhancer 4636..5015
/label="CMV enhancer"
/note="human cytomegalovirus immediate early enhancer"
promoter 5016..5219
/label="CMV promoter"
/note="human cytomegalovirus (CMV) immediate early
promoter"
promoter 5264..5282
/label="T7 promoter"
/note="promoter for bacteriophage T7 RNA polymerase"
CDS 5403..6119
/label="EGFP"
/note="the original enhanced GFP (Yang et al., 1996)"
misc_feature 6173..6761
/label="WPRE"
/note="woodchuck hepatitis virus posttranscriptional
regulatory element"
LTR 7286..7466
/label="5' LTR (truncated)"
/note="truncated 5' long terminal repeat (LTR) from HIV-1"
polyA_signal 7498..7722
/label="bGH poly(A) signal"
/note="bovine growth hormone polyadenylation signal"
rep_origin 7768..8196
/label="f1 ori"
/note="f1 bacteriophage origin of replication; arrow
indicates direction of (+) strand synthesis"
promoter 8210..8539
/label="SV40 promoter"
/note="SV40 enhancer and early promoter"
promoter 8587..8634
/label="EM7 promoter"
/note="synthetic bacterial promoter"
CDS 8653..9024
/label="BleoR"
/note="antibiotic-binding protein"
polyA_signal 9157..9290
/label="SV40 poly(A) signal"
/note="SV40 polyadenylation signal"
promoter complement(9375..9405)
/label="lac promoter"
/note="promoter for the E. coli lac operon"
protein_bind complement(9420..9441)
/label="CAP binding site"
/note="CAP binding activates transcription in the presence
of cAMP."
rep_origin complement(9729..10317)
/label="ori"
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
CDS complement(10491..11348)
/label="AmpR"
/note="β-lactamase"
promoter complement(11349..11453)
/label="AmpR promoter"
enhancer 11719..12098
/label="CMV enhancer"
/note="human cytomegalovirus immediate early enhancer"
promoter 12099..12301
/label="CMV promoter"
/note="human cytomegalovirus (CMV) immediate early
promoter"
LTR 12316..12496
/label="5' LTR (truncated)"
/note="truncated 5' long terminal repeat (LTR) from HIV-1"
misc_feature 12543..12668
/label="HIV-1 Ψ"
/note="packaging signal of human immunodeficiency virus
type 1"
misc_feature 13161..13394
/label="RRE"
/note="The Rev response element (RRE) of HIV-1 allows for
Rev-dependent mRNA export from the nucleus to the
cytoplasm."
CDS 13579..13623
/label="gp41 peptide"
/note="antigenic peptide corresponding to amino acids 655
to 669 of the HIV envelope protein gp41 (Lutje Hulsik et
al., 2013)"
CDS 13772..13813
/gene="Protein Tat"
/label="Protein Tat"
/note="Protein Tat from Human immunodeficiency virus type 1
group M subtype B (isolate WMJ22). Accession#: P12509"
misc_feature 13921..14038
/label="cPPT/CTS"
/note="central polypurine tract and central termination
sequence of HIV-1"
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