pHR-OptoCAR-mScarlet vector (V017806)

Basic Vector Information

Vector Name:
pHR-OptoCAR-mScarlet
Antibiotic Resistance:
Ampicillin
Length:
11966 bp
Type:
Protein expression
Replication origin:
ori
Host:
Mammalian cells, Lentivirus
Promoter:
SFFV
Growth Strain(s):
Stbl3
Growth Temperature:
37℃

pHR-OptoCAR-mScarlet vector Map

pHR-OptoCAR-mScarlet11966 bp50010001500200025003000350040004500500055006000650070007500800085009000950010000105001100011500SFFV promotermScarletHAWPRE3' LTR (ΔU3)SP6 promoterAmpR promoterAmpRoriSV40 promotersmall t intronSV40 NLSSV40 poly(A) signal5' LTR (truncated)HIV-1 ΨRREgp41 peptideProtein TatcPPT/CTS

pHR-OptoCAR-mScarlet vector Sequence

LOCUS       .                      11966 bp    DNA     circular UNK 01-JAN-1980
DEFINITION  synthetic circular DNA.
ACCESSION   
VERSION     
KEYWORDS    .
SOURCE      .
  ORGANISM  .
            .
FEATURES             Location/Qualifiers
     promoter        1..408
                     /label="SFFV promoter"
                     /note="spleen focus-forming virus long terminal repeat
                     (LTR) promoter"
     CDS             1034..1729
                     /label="mScarlet"
                     /note="bright monomeric red fluorescent protein evolved
                     from a synthetic template (Bindels et al., 2016)"
     CDS             1868..1894
                     /label="HA"
                     /note="HA (human influenza hemagglutinin) epitope tag"
     misc_feature    3511..4099
                     /label="WPRE"
                     /note="woodchuck hepatitis virus posttranscriptional
                     regulatory element"
     LTR             4209..4442
                     /label="3' LTR (ΔU3)"
                     /note="self-inactivating 3' long terminal repeat (LTR) from
                     HIV-1"
     promoter        complement(4467..4485)
                     /label="SP6 promoter"
                     /note="promoter for bacteriophage SP6 RNA polymerase"
     promoter        5273..5377
                     /label="AmpR promoter"
     CDS             5378..6235
                     /label="AmpR"
                     /note="β-lactamase"
     rep_origin      6409..6997
                     /label="ori"
                     /note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
                     replication"
     promoter        7243..7572
                     /label="SV40 promoter"
                     /note="SV40 enhancer and early promoter"
     intron          8706..8771
                     /label="small t intron"
                     /note="SV40 (simian virus 40) small t antigen intron"
     CDS             8901..8921
                     /label="SV40 NLS"
                     /note="nuclear localization signal of SV40 (simian virus
                     40) large T antigen"
     polyA_signal    9346..9480
                     /label="SV40 poly(A) signal"
                     /note="SV40 polyadenylation signal"
     LTR             10024..10281
                     /label="5' LTR (truncated)"
                     /note="truncated 5' long terminal repeat (LTR) from HIV-1"
     misc_feature    10328..10453
                     /label="HIV-1 Ψ"
                     /note="packaging signal of human immunodeficiency virus
                     type 1"
     misc_feature    10950..11183
                     /label="RRE"
                     /note="The Rev response element (RRE) of HIV-1 allows for
                     Rev-dependent mRNA export from the nucleus to the
                     cytoplasm."
     CDS             11368..11412
                     /label="gp41 peptide"
                     /note="antigenic peptide corresponding to amino acids 655
                     to 669 of the HIV envelope protein gp41 (Lutje Hulsik et
                     al., 2013)"
     CDS             11561..11602
                     /gene="Protein Tat"
                     /label="Protein Tat"
                     /note="Protein Tat from Human immunodeficiency virus type 1
                     group M subtype B (isolate WMJ22). Accession#: P12509"
     misc_feature    11697..11814
                     /label="cPPT/CTS"
                     /note="central polypurine tract and central termination
                     sequence of HIV-1"

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