Basic Vector Information
- Vector Name:
- pHR-OptoCAR-mScarlet
- Antibiotic Resistance:
- Ampicillin
- Length:
- 11966 bp
- Type:
- Protein expression
- Replication origin:
- ori
- Host:
- Mammalian cells, Lentivirus
- Promoter:
- SFFV
- Growth Strain(s):
- Stbl3
- Growth Temperature:
- 37℃
pHR-OptoCAR-mScarlet vector Map
pHR-OptoCAR-mScarlet vector Sequence
LOCUS . 11966 bp DNA circular UNK 01-JAN-1980
DEFINITION synthetic circular DNA.
ACCESSION
VERSION
KEYWORDS .
SOURCE .
ORGANISM .
.
FEATURES Location/Qualifiers
promoter 1..408
/label="SFFV promoter"
/note="spleen focus-forming virus long terminal repeat
(LTR) promoter"
CDS 1034..1729
/label="mScarlet"
/note="bright monomeric red fluorescent protein evolved
from a synthetic template (Bindels et al., 2016)"
CDS 1868..1894
/label="HA"
/note="HA (human influenza hemagglutinin) epitope tag"
misc_feature 3511..4099
/label="WPRE"
/note="woodchuck hepatitis virus posttranscriptional
regulatory element"
LTR 4209..4442
/label="3' LTR (ΔU3)"
/note="self-inactivating 3' long terminal repeat (LTR) from
HIV-1"
promoter complement(4467..4485)
/label="SP6 promoter"
/note="promoter for bacteriophage SP6 RNA polymerase"
promoter 5273..5377
/label="AmpR promoter"
CDS 5378..6235
/label="AmpR"
/note="β-lactamase"
rep_origin 6409..6997
/label="ori"
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
promoter 7243..7572
/label="SV40 promoter"
/note="SV40 enhancer and early promoter"
intron 8706..8771
/label="small t intron"
/note="SV40 (simian virus 40) small t antigen intron"
CDS 8901..8921
/label="SV40 NLS"
/note="nuclear localization signal of SV40 (simian virus
40) large T antigen"
polyA_signal 9346..9480
/label="SV40 poly(A) signal"
/note="SV40 polyadenylation signal"
LTR 10024..10281
/label="5' LTR (truncated)"
/note="truncated 5' long terminal repeat (LTR) from HIV-1"
misc_feature 10328..10453
/label="HIV-1 Ψ"
/note="packaging signal of human immunodeficiency virus
type 1"
misc_feature 10950..11183
/label="RRE"
/note="The Rev response element (RRE) of HIV-1 allows for
Rev-dependent mRNA export from the nucleus to the
cytoplasm."
CDS 11368..11412
/label="gp41 peptide"
/note="antigenic peptide corresponding to amino acids 655
to 669 of the HIV envelope protein gp41 (Lutje Hulsik et
al., 2013)"
CDS 11561..11602
/gene="Protein Tat"
/label="Protein Tat"
/note="Protein Tat from Human immunodeficiency virus type 1
group M subtype B (isolate WMJ22). Accession#: P12509"
misc_feature 11697..11814
/label="cPPT/CTS"
/note="central polypurine tract and central termination
sequence of HIV-1"
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