PiggyBac-shRNA vector (V017722)

Basic Vector Information

Vector Name:
PiggyBac-shRNA
Antibiotic Resistance:
Ampicillin
Length:
7156 bp
Type:
RNAi, Transposition
Replication origin:
ori
Host:
Mammalian cells
Selection Marker:
Puro
Promoter:
EF1a
3' Primer:
EF1a-R
Growth Strain(s):
Stbl3
Growth Temperature:
37℃

PiggyBac-shRNA vector Map

PiggyBac-shRNA7156 bp30060090012001500180021002400270030003300360039004200450048005100540057006000630066006900AmpR promoterf1 oriM13 fwdEF-1α core promoter5' LTR (truncated)CopGFPT2APuroRSV40 poly(A) signalH1 promoterM13 revlac operatorlac promoterCAP binding siteoriAmpR

PiggyBac-shRNA vector Sequence

LOCUS       .                       7156 bp    DNA     circular UNK 01-JAN-1980
DEFINITION  synthetic circular DNA.
ACCESSION   
VERSION     
KEYWORDS    .
SOURCE      .
  ORGANISM  .
            .
FEATURES             Location/Qualifiers
     promoter        complement(1..105)
                     /label="AmpR promoter"
     rep_origin      complement(131..586)
                     /label="f1 ori"
                     /note="f1 bacteriophage origin of replication; arrow
                     indicates direction of (+) strand synthesis"
     primer_bind     728..744
                     /label="M13 fwd"
                     /note="common sequencing primer, one of multiple similar
                     variants"
     promoter        1426..1637
                     /label="EF-1α core promoter"
                     /note="core promoter for human elongation factor EF-1α"
     LTR             1650..1918
                     /label="5' LTR (truncated)"
                     /note="truncated 5' long terminal repeat (LTR) from human
                     T-cell leukemia virus (HTLV) type 1"
     CDS             1974..2639
                     /label="CopGFP"
                     /note="green fluorescent protein 2 from Pontellina plumata,
                     also known as ppluGFP2 (Shagin et al., 2004)"
     CDS             2709..2762
                     /label="T2A"
                     /note="2A peptide from Thosea asigna virus capsid protein"
     CDS             2763..3359
                     /label="PuroR"
                     /note="puromycin N-acetyltransferase"
     polyA_signal    3470..3602
                     /label="SV40 poly(A) signal"
                     /note="SV40 polyadenylation signal"
     promoter        4079..4293
                     /label="H1 promoter"
                     /note="human H1 RNA promoter"
     primer_bind     complement(5135..5151)
                     /label="M13 rev"
                     /note="common sequencing primer, one of multiple similar
                     variants"
     protein_bind    complement(5159..5175)
                     /label="lac operator"
                     /note="The lac repressor binds to the lac operator to
                     inhibit transcription in E. coli. This inhibition can be
                     relieved by adding lactose or
                     isopropyl-β-D-thiogalactopyranoside (IPTG)."
     promoter        complement(5183..5213)
                     /label="lac promoter"
                     /note="promoter for the E. coli lac operon"
     protein_bind    complement(5228..5249)
                     /label="CAP binding site"
                     /note="CAP binding activates transcription in the presence
                     of cAMP."
     rep_origin      complement(5537..6125)
                     /label="ori"
                     /note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
                     replication"
     CDS             complement(6299..7156)
                     /label="AmpR"
                     /note="β-lactamase"

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