Basic Vector Information
- Vector Name:
- CRISPR-SP-Cas9 reporter
- Antibiotic Resistance:
- Ampicillin
- Length:
- 8960 bp
- Type:
- Gene knockout
- Replication origin:
- ori
- Host:
- Mammalian cells, Lentivirus
- Selection Marker:
- Puro
- Promoter:
- EF-1α
- Growth Strain(s):
- Stbl3
- Growth Temperature:
- 37℃
CRISPR-SP-Cas9 reporter vector Vector Map
Plasmid Resuspension Protocol:
1. Centrifuge at 5,000×g for 5 min.
2. Carefully open the tube and add 20 μl of sterile water to dissolve the DNA.
3. Close the tube and incubate for 10 minutes at room temperature.
4. Briefly vortex the tube and then do a quick spin to concentrate the liquid at the bottom. Speed is less than 5000×g.
5.Store the plasmid at -20 ℃.
CRISPR-SP-Cas9 reporter vector Sequence
LOCUS 62056_596 8960 bp DNA circular SYN 01-JAN-1980
DEFINITION synthetic circular DNA.
ACCESSION .
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 8960)
AUTHORS .
TITLE Direct Submission
FEATURES Location/Qualifiers
source 1..8960
/mol_type="other DNA"
/organism="synthetic DNA construct"
LTR 1..634
/label=3' LTR
/note="3' long terminal repeat (LTR) from HIV-1"
misc_feature 681..806
/label=HIV-1 Psi
/note="packaging signal of human immunodeficiency virus
type 1"
misc_feature 1303..1536
/label=RRE
/note="The Rev response element (RRE) of HIV-1 allows for
Rev-dependent mRNA export from the nucleus to the
cytoplasm."
CDS 1721..1765
/label=gp41 peptide
/note="antigenic peptide corresponding to amino acids 655
to 669 of the HIV envelope protein gp41 (Lutje Hulsik et
al., 2013)"
CDS 1914..1955
/note="Protein Tat from Human immunodeficiency virus type 1
group M subtype B (isolate WMJ22). Accession#: P12509"
misc_feature 2058..2175
/label=cPPT/CTS
/note="central polypurine tract and central termination
sequence of HIV-1"
promoter 2223..3401
/label=EF-1-alpha promoter
/note="strong constitutive promoter for human elongation
factor EF-1-alpha"
CDS 3421..3447
/label=HA
/note="HA (human influenza hemagglutinin) epitope tag"
CDS 3503..4201
/label=dTomato
/note="dimeric variant of DsRed fluorescent protein (Shaner
et al., 2004)"
misc_feature 4207..4785
/label=IRES2
/note="internal ribosome entry site (IRES) of the
encephalomyocarditis virus (EMCV)"
CDS 4789..5385
/label=PuroR
/note="puromycin N-acetyltransferase"
misc_feature 5402..5990
/label=WPRE
/note="woodchuck hepatitis virus posttranscriptional
regulatory element"
LTR 6138..6318
/label=5' LTR (truncated)
/note="truncated 5' long terminal repeat (LTR) from HIV-1"
promoter 6451..6555
/label=AmpR promoter
CDS 6556..7413
/label=AmpR
/note="beta-lactamase"
rep_origin 7587..8175
/label=ori
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
protein_bind 8586..8607
/label=CAP binding site
/note="CAP binding activates transcription in the presence
of cAMP."
promoter 8622..8652
/label=lac promoter
/note="promoter for the E. coli lac operon"
protein_bind 8660..8676
/label=lac operator
/note="The lac repressor binds to the lac operator to
inhibit transcription in E. coli. This inhibition can be
relieved by adding lactose or
isopropyl-beta-D-thiogalactopyranoside (IPTG)."
primer_bind 8684..8700
/label=M13 rev
/note="common sequencing primer, one of multiple similar
variants"
This page is informational only.