Basic Vector Information
- Vector Name:
- Lenti-iCas9-neo
- Antibiotic Resistance:
- Ampicillin
- Length:
- 15200 bp
- Type:
- Gene knockout
- Replication origin:
- ori
- Host:
- Mammalian cells, Lentivirus
- Selection Marker:
- Neo/G418
- Promoter:
- UbC
- Growth Strain(s):
- Stbl3
- Growth Temperature:
- 37℃
Lenti-iCas9-neo vector Vector Map
Plasmid Resuspension Protocol:
1. Centrifuge at 5,000×g for 5 min.
2. Carefully open the tube and add 20 μl of sterile water to dissolve the DNA.
3. Close the tube and incubate for 10 minutes at room temperature.
4. Briefly vortex the tube and then do a quick spin to concentrate the liquid at the bottom. Speed is less than 5000×g.
5.Store the plasmid at -20 ℃.
Lenti-iCas9-neo vector Sequence
LOCUS V017072 15200 bp DNA circular SYN 01-JAN-1980
DEFINITION Exported.
ACCESSION V017072
VERSION V017072
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
.
REFERENCE 1 (bases 1 to 15200)
AUTHORS .
TITLE Direct Submission
FEATURES Location/Qualifiers
source 1..15200
/mol_type="other DNA"
/organism="synthetic DNA construct"
LTR 1..634
/label="3' LTR"
/note="3' long terminal repeat (LTR) from HIV-1"
misc_feature 681..806
/label="HIV-1 Psi"
/note="packaging signal of human immunodeficiency virus
type 1"
misc_feature 1303..1536
/label="RRE"
/note="The Rev response element (RRE) of HIV-1 allows for
Rev-dependent mRNA export from the nucleus to the
cytoplasm."
CDS 1721..1765
/label="gp41 peptide"
/note="antigenic peptide corresponding to amino acids 655
to 669 of the HIV envelope protein gp41 (Lutje Hulsik et
al., 2013)"
CDS 1914..1955
/note="Protein Tat from Human immunodeficiency virus type 1
group M subtype B (isolate WMJ22). Accession#: P12509"
/label="Protein Tat"
misc_feature 2058..2175
/label="cPPT/CTS"
/note="central polypurine tract and central termination
sequence of HIV-1"
protein_bind 2230..2500
/label="tetracycline response element"
/note="contains seven copies of the tetracycline operator
tetO"
promoter 2533..2571
/label="minimal CMV promoter"
/note="human cytomegalovirus (CMV) immediate early
promoter"
protein_bind 2701..2725
/label="attB1"
/note="recombination site for the Gateway(R) BP reaction"
CDS 2821..6921
/label="Cas9"
/note="Cas9 (Csn1) endonuclease from the Streptococcus
pyogenes Type II CRISPR/Cas system"
CDS 7048..7764
/label="EGFP"
/note="enhanced GFP"
protein_bind complement(7772..7796)
/label="attB2"
/note="recombination site for the Gateway(R) BP reaction"
CDS 7849..7875
/label="HA"
/note="HA (human influenza hemagglutinin) epitope tag"
promoter 7961..9172
/label="UbC promoter"
/note="human ubiquitin C promoter"
CDS 9231..9974
/label="rtTA-Advanced"
/note="improved tetracycline-controlled transactivator"
misc_feature 10030..10603
/label="IRES"
/note="internal ribosome entry site (IRES) of the
encephalomyocarditis virus (EMCV)"
CDS 10619..11410
/label="NeoR/KanR"
/note="aminoglycoside phosphotransferase"
misc_feature 11590..12178
/label="WPRE"
/note="woodchuck hepatitis virus posttranscriptional
regulatory element"
LTR 12253..12486
/label="3' LTR (Delta-U3)"
/note="self-inactivating 3' long terminal repeat (LTR) from
HIV-1"
promoter 12691..12795
/label="AmpR promoter"
CDS 12796..13653
/label="AmpR"
/note="beta-lactamase"
rep_origin 13827..14415
/label="ori"
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
protein_bind 14826..14847
/label="CAP binding site"
/note="CAP binding activates transcription in the presence
of cAMP."
promoter 14862..14892
/label="lac promoter"
/note="promoter for the E. coli lac operon"
protein_bind 14900..14916
/label="lac operator"
/note="The lac repressor binds to the lac operator to
inhibit transcription in E. coli. This inhibition can be
relieved by adding lactose or
isopropyl-beta-D-thiogalactopyranoside (IPTG)."
primer_bind 14924..14940
/label="M13 rev"
/note="common sequencing primer, one of multiple similar
variants"
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