Basic Vector Information
- Vector Name:
- LentiGuide-TagRFP-2A-BSD
- Antibiotic Resistance:
- Ampicillin
- Length:
- 11231 bp
- Type:
- Gene knockout
- Replication origin:
- ori
- Host:
- Mammalian cells, Lentivirus
- Selection Marker:
- Blast
- Promoter:
- SV40
- Growth Strain(s):
- Stbl3
- Growth Temperature:
- 30℃
LentiGuide-TagRFP-2A-BSD vector Vector Map
Plasmid Resuspension Protocol:
1. Centrifuge at 5,000×g for 5 min.
2. Carefully open the tube and add 20 μl of sterile water to dissolve the DNA.
3. Close the tube and incubate for 10 minutes at room temperature.
4. Briefly vortex the tube and then do a quick spin to concentrate the liquid at the bottom. Speed is less than 5000×g.
5.Store the plasmid at -20 ℃.
LentiGuide-TagRFP-2A-BSD vector Sequence
LOCUS V017030 11231 bp DNA circular SYN 01-JAN-1980
DEFINITION Exported.
ACCESSION V017030
VERSION V017030
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
.
REFERENCE 1 (bases 1 to 11231)
AUTHORS .
TITLE Direct Submission
FEATURES Location/Qualifiers
source 1..11231
/mol_type="other DNA"
/organism="synthetic DNA construct"
enhancer 1..380
/label="CMV enhancer"
/note="human cytomegalovirus immediate early enhancer"
promoter 381..583
/label="CMV promoter"
/note="human cytomegalovirus (CMV) immediate early
promoter"
LTR 598..778
/label="5' LTR (truncated)"
/note="truncated 5' long terminal repeat (LTR) from HIV-1"
misc_feature 825..950
/label="HIV-1 Psi"
/note="packaging signal of human immunodeficiency virus
type 1"
misc_feature 1443..1676
/label="RRE"
/note="The Rev response element (RRE) of HIV-1 allows for
Rev-dependent mRNA export from the nucleus to the
cytoplasm."
CDS 1861..1905
/label="gp41 peptide"
/note="antigenic peptide corresponding to amino acids 655
to 669 of the HIV envelope protein gp41 (Lutje Hulsik et
al., 2013)"
CDS 2054..2095
/note="Protein Tat from Human immunodeficiency virus type 1
group M subtype B (isolate WMJ22). Accession#: P12509"
/label="Protein Tat"
misc_feature 2203..2320
/label="cPPT/CTS"
/note="central polypurine tract and central termination
sequence of HIV-1"
promoter 2371..2611
/label="U6 promoter"
/note="RNA polymerase III promoter for human U6 snRNA"
misc_RNA 4501..4576
/label="gRNA scaffold"
/note="guide RNA scaffold for the Streptococcus pyogenes
CRISPR/Cas9 system"
promoter 4638..4849
/label="EF-1-alpha core promoter"
/note="core promoter for human elongation factor
EF-1-alpha"
CDS 4874..5605
/label="TagRFP-T"
/note="photostable variant of TagRFP (Shaner et al., 2008)"
CDS 5672..6067
/label="BSD"
/note="blasticidin S deaminase"
misc_feature 6086..6674
/label="WPRE"
/note="woodchuck hepatitis virus posttranscriptional
regulatory element"
LTR 6746..6979
/label="3' LTR (Delta-U3)"
/note="self-inactivating 3' long terminal repeat (LTR) from
HIV-1"
polyA_signal 7011..7235
/label="bGH poly(A) signal"
/note="bovine growth hormone polyadenylation signal"
rep_origin 7281..7709
/label="f1 ori"
/note="f1 bacteriophage origin of replication; arrow
indicates direction of (+) strand synthesis"
promoter 7723..8052
/label="SV40 promoter"
/note="SV40 enhancer and early promoter"
promoter 8100..8147
/label="EM7 promoter"
/note="synthetic bacterial promoter"
CDS 8166..8537
/label="BleoR"
/note="antibiotic-binding protein"
polyA_signal 8670..8803
/label="SV40 poly(A) signal"
/note="SV40 polyadenylation signal"
promoter complement(8888..8918)
/label="lac promoter"
/note="promoter for the E. coli lac operon"
protein_bind complement(8933..8954)
/label="CAP binding site"
/note="CAP binding activates transcription in the presence
of cAMP."
rep_origin complement(9242..9830)
/direction=LEFT
/label="ori"
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
CDS complement(10004..10861)
/label="AmpR"
/note="beta-lactamase"
promoter complement(10862..10966)
/label="AmpR promoter"
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