Basic Vector Information
- Vector Name:
- pSO_IA(5)_HQN
- Antibiotic Resistance:
- Ampicillin
- Length:
- 3748 bp
- Type:
- Cloning vector
- Replication origin:
- ori
- Source/Author:
- Groseclose TM, Rondon RE, Herde ZD, Aldrete CA
pSO_IA(5)_HQN vector Map
pSO_IA(5)_HQN vector Sequence
LOCUS 62056_20075 3748 bp DNA circular SYN 10-SEP-2020
DEFINITION Cloning vector pSO_IA(5)_HQN, complete sequence.
ACCESSION MT127331
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 3748)
AUTHORS Groseclose TM, Rondon RE, Herde ZD, Aldrete CA, Wilson CJ.
TITLE Engineered systems of inducible anti-repressors for the next
generation of biological programming
JOURNAL Nat Commun 11 (1), 4440 (2020)
PUBMED 32895374
REFERENCE 2 (bases 1 to 3748)
AUTHORS Groseclose TM, Rondon RE, Herde ZD, Aldrete CA, Wilson CJ.
TITLE Direct Submission
JOURNAL
REFERENCE 3 (bases 1 to 3748)
AUTHORS .
TITLE Direct Submission
COMMENT SGRef: number: 1; type: "Journal Article"; journalName: "Nat
Commun"; date: "2020"; volume: "11"; issue: "1"; pages: "4440"
COMMENT SGRef: number: 2; type: "Journal Article"; journalName: "Submitted
(28-FEB-2020) Chemical "
COMMENT ##Assembly-Data-START##
Sequencing Technology :: Sanger dideoxy sequencing
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..3748
/mol_type="other DNA"
/organism="synthetic DNA construct"
CDS 101..289
/codon_start=1
/label=rop
/note="Rop protein, which maintains plasmids at low copy
number"
/translation="VTKQEKTALNMARFIRSQTLTLLEKLNELDADEQADICESLHDHA
DELYRSCLARFGDDGENL"
misc_feature 394..536
/label=bom
/note="basis of mobility region from pBR322"
promoter 693..797
/label=AmpR promoter
CDS 798..1655
/codon_start=1
/label=AmpR
/note="beta-lactamase"
/translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI
ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYS
PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW
EPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA
LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS
LIKHW"
rep_origin 1829..2417
/label=ori
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
promoter 2553..2630
/label=lacIq promoter
/note="In the lacIq allele, a single base change in the
promoter boosts expression of the lacI gene about 10-fold."
CDS 2631..3710
/codon_start=1
/label=lacI
/note="lac repressor"
/translation="VKPVTLYDVAEYAGVSHQTVSNVVNQASHVSAKTREKVEAAMAEL
NYIPNRVAQQLAGKQSLLIGVATSSLALHAPSQIVAAIKSRADQLGASVAVPMVERRGV
EACKTAVHNLLAQRVSGLIINYPLDDQDAIAVEAACTNVPALFLDVSDQTPINSIIFSH
EDGTRLGVEHLVALGHQQIALLAGPLSSVSARLRLAGWHKYLTRNQIQPIAEREGDWSA
MSGFQQTMQMLNEGIVPTAMLVANDQMALGAMRAITESGLRVGADISVVGYDDTEDSSC
YIPPLTTIKQDFRLLGQTSVDRLLQLSQGQAVKGNQLLPVSLVKRKTTLAPNTQTASPR
ALADSLMQLARQVSRLESGQ"
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