Basic Vector Information
- Vector Name:
- p641-LI-Esp3I
- Antibiotic Resistance:
- Gentamycin
- Length:
- 4952 bp
- Type:
- Cloning vector
- Replication origin:
- ori
- Source/Author:
- Chiasson D, Gimenez-Oya V, Bircheneder M, Bachmaier S
- Promoter:
- Pc
p641-LI-Esp3I vector Map
p641-LI-Esp3I vector Sequence
LOCUS 62056_2220 4952 bp DNA circular SYN 29-JUL-2019
DEFINITION Cloning vector p641 LI-Esp3I, complete sequence.
ACCESSION MK495749
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 4952)
AUTHORS Chiasson D, Gimenez-Oya V, Bircheneder M, Bachmaier S, Studtrucker
T, Ryan J, Sollweck K, Leonhardt H, Boshart M, Dietrich P, Parniske
M.
TITLE A unified multi-kingdom Golden Gate cloning platform
JOURNAL Sci Rep 9 (1), 10131 (2019)
PUBMED 31300661
REFERENCE 2 (bases 1 to 4952)
AUTHORS Chiasson D.
TITLE Direct Submission
JOURNAL Submitted (06-FEB-2019) Biology, LMU Munich, Grosshaderner Str. 2-4,
Martinsried 82152, Germany
REFERENCE 3 (bases 1 to 4952)
AUTHORS .
TITLE Direct Submission
COMMENT SGRef: number: 1; type: "Journal Article"; journalName: "Sci Rep";
date: "2019"; volume: "9"; issue: "1"; pages: "10131"
COMMENT SGRef: number: 2; type: "Journal Article"; journalName: "Submitted
(06-FEB-2019) Biology, LMU Munich, Grosshaderner Str. 2-4,
Martinsried 82152, Germany"
FEATURES Location/Qualifiers
source 1..4952
/mol_type="other DNA"
/organism="synthetic DNA construct"
promoter 195..225
/label=lac UV5 promoter
/note="E. coli lac promoter with an 'up' mutation"
CDS 279..935
/codon_start=1
/label=CmR
/note="chloramphenicol acetyltransferase"
/translation="MEKKITGYTTVDISQWHRKEHFEAFQSVAQCTYNQTVQLDITAFL
KTVKKNKHKFYPAFIHILARLMNAHPEFRMAMKDGELVIWDSVHPCYTVFHEQTETFSS
LWSEYHDDFRQFLHIYSQDVACYGENLAYFPKGFIENMFFVSANPWVSFTSFDLNVANM
DNFFAPVFTMGKYYTQGDKVLMPLAIQVHHAVCDGFHVGRMLNELQQYCDEWQGGA"
CDS 1280..1582
/codon_start=1
/label=ccdB
/note="CcdB, a bacterial toxin that poisons DNA gyrase"
/translation="MQFKVYTYKRESRYRLFVDVQSDIIDTPGRRMVIPLASARLLSDK
VPRELYPVVHIGDESWRMMTTDMASVPVSVIGEEVADLSHRENDIKNAINLMFWGI"
terminator 1659..1753
/label=lambda t0 terminator
/note="transcription terminator from phage lambda"
promoter 1784..1812
/label=Pc promoter
/note="class 1 integron promoter"
CDS 2001..2531
/codon_start=1
/label=GmR
/note="gentamycin acetyltransferase"
/translation="MLRSSNDVTQQGSRPKTKLGGSSMGIIRTCRLGPDQVKSMRAALD
LFGREFGDVATYSQHQPDSDYLGNLLRSKTFIALAAFDQEAVVGALAAYVLPKFEQPRS
EIYIYDLAVSGEHRRQGIATALINLLKHEANALGAYVIYVQADYGDDPAVALYTKLGIR
EEVMHFDIDPSTAT"
oriT 2745..2853
/label=oriT
/note="incP origin of transfer"
rep_origin 2947..3535
/direction=RIGHT
/label=ori
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
CDS complement(3592..4422)
/codon_start=1
/label=pRO1600 Rep
/note="replication protein for the broad-host-range plasmid
pRO1600 from Pseudomonas aeruginosa"
/translation="VASPPMVYKSNALVEAAYRLSVQEQRIVLACISQVKRSEPVTDEV
MYSVTAEDIATMAGVPIESSYNQLKEAALRLKRREVRLTQEPNGKGKRPSVMITGWVQT
IIYREGEGRVELRFTKDMLPYLTELTKQFTKYALADVAKMDSTHAIRLYELLMQWDSIG
QREIEIDQLRKWFQLEGRYPSIKDFKLRVLDPAVTQINEHSPLQVEWAQRKTGRKVTHL
LFSFGPKKPAKAVGKAPAKRKAGKISDAEIAKQARPGETWEAARARLTQMPLDLA"
rep_origin 4436..4787
/label=pRO1600 oriV
/note="broad-host-range origin of replication from
Pseudomonas aeruginosa plasmid pRO1600; requires the
pRO1600 Rep protein for replication (West et al., 1994)"
terminator complement(4860..4946)
/label=rrnB T1 terminator
/note="transcription terminator T1 from the E. coli rrnB
gene"
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