Basic Vector Information
- Vector Name:
- pDCpOE-N-N5L
- Antibiotic Resistance:
- Chloramphenicol
- Length:
- 7691 bp
- Type:
- Cloning vector
- Replication origin:
- ori
- Host:
- Yeast
- Source/Author:
- Nemeth T.
- Promoter:
- TEF
pDCpOE-N-N5L vector Map
pDCpOE-N-N5L vector Sequence
LOCUS 62056_8340 7691 bp DNA circular SYN 03-MAR-2020
DEFINITION Cloning vector pDCpOE-N-N5L, complete sequence.
ACCESSION MN974376
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 7691)
AUTHORS Nemeth T.
TITLE Direct Submission
JOURNAL Submitted (20-JAN-2020) Department of Microbiology, University of
Szeged, Kozep fasor 52, Szeged, Csongrad 6726, Hungary
REFERENCE 2 (bases 1 to 7691)
AUTHORS .
TITLE Direct Submission
COMMENT SGRef: number: 1; type: "Journal Article"; journalName: "Submitted
(20-JAN-2020) Department of Microbiology, University of Szeged,
Kozep fasor 52, Szeged, Csongrad 6726, Hungary"
COMMENT ##Assembly-Data-START##
Assembly Method :: CLC Genomics Workbench v. v11
Sequencing Technology :: IonTorrent
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..7691
/mol_type="other DNA"
/organism="synthetic DNA construct"
promoter 24..128
/label=AmpR promoter
CDS 129..986
/label=AmpR
/note="beta-lactamase"
rep_origin 1160..1748
/label=ori
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
protein_bind 2036..2057
/label=CAP binding site
/note="CAP binding activates transcription in the presence
of cAMP."
promoter 2072..2102
/label=lac promoter
/note="promoter for the E. coli lac operon"
protein_bind 2110..2126
/label=lac operator
/note="The lac repressor binds to the lac operator to
inhibit transcription in E. coli. This inhibition can be
relieved by adding lactose or
isopropyl-beta-D-thiogalactopyranoside (IPTG)."
primer_bind 2134..2150
/label=M13 rev
/note="common sequencing primer, one of multiple similar
variants"
promoter 2171..2189
/label=T3 promoter
/note="promoter for bacteriophage T3 RNA polymerase"
regulatory 2222..3071
/label=Candida albicans TDH3 promoter
/note="Candida albicans TDH3 promoter"
/regulatory_class="promoter"
protein_bind 3078..3202
/label=attR1
/note="recombination site for the Gateway(R) LR reaction"
promoter 3227..3257
/label=lac UV5 promoter
/note="E. coli lac promoter with an 'up' mutation"
CDS 3311..3967
/label=CmR
/note="chloramphenicol acetyltransferase"
CDS 4312..4614
/label=ccdB
/note="CcdB, a bacterial toxin that poisons DNA gyrase"
protein_bind complement(4658..4782)
/label=attR2
/note="recombination site for the Gateway(R) LR reaction"
regulatory 4803..5043
/label=Saccharomyces cerevisiae URA3 terminator
/note="Saccharomyces cerevisiae URA3 terminator"
/regulatory_class="terminator"
misc_feature 5064..5437
/label=Candida parapsilosis NEUT5L sequence upstream
/note="Candida parapsilosis NEUT5L sequence upstream"
misc_feature 5438..5443
/label=StuI site for plasmid linearization
/note="StuI site for plasmid linearization"
misc_feature 5444..5827
/label=Candida parapsilosis NEUT5L sequence downstream
/note="Candida parapsilosis NEUT5L sequence downstream"
terminator complement(5854..6051)
/label=TEF terminator
/note="Ashbya gossypii TEF terminator"
CDS complement(6069..6632)
/label=NrsR
/note="nourseothricin acetyltransferase"
promoter complement(6652..6995)
/label=TEF promoter
/note="Ashbya gossypii TEF promoter"
promoter complement(7052..7070)
/label=T7 promoter
/note="promoter for bacteriophage T7 RNA polymerase"
primer_bind complement(7077..7093)
/label=M13 fwd
/note="common sequencing primer, one of multiple similar
variants"
rep_origin complement(7234..7689)
/direction=LEFT
/label=f1 ori
/note="f1 bacteriophage origin of replication; arrow
indicates direction of (+) strand synthesis"
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