Basic Vector Information
- Vector Name:
- pLV-U6-MCS-sgRNA-Blast-EGFP
- Antibiotic Resistance:
- Ampicillin
- Length:
- 8231 bp
- Type:
- Genome editing
- Replication origin:
- ori
- Host:
- Mammalian cells, Lentivirus
- Selection Marker:
- Blast
- Promoter:
- hPGK
- 5' Primer:
- U6
- Growth Temperature:
- 37℃
pLV-U6-MCS-sgRNA-Blast-EGFP vector Vector Map
Plasmid Resuspension Protocol:
1. Centrifuge at 5,000×g for 5 min.
2. Carefully open the tube and add 20 μl of sterile water to dissolve the DNA.
3. Close the tube and incubate for 10 minutes at room temperature.
4. Briefly vortex the tube and then do a quick spin to concentrate the liquid at the bottom. Speed is less than 5000×g.
5.Store the plasmid at -20 ℃.
pLV-U6-MCS-sgRNA-Blast-EGFP vector Sequence
LOCUS 62056_14610 8231 bp DNA circular SYN 01-JAN-1980 DEFINITION synthetic circular DNA. ACCESSION . VERSION . KEYWORDS . SOURCE synthetic DNA construct ORGANISM synthetic DNA construct REFERENCE 1 (bases 1 to 8231) AUTHORS . TITLE Direct Submission FEATURES Location/Qualifiers source 1..8231 /mol_type="other DNA" /organism="synthetic DNA construct" promoter 5..231 /label=RSV promoter /note="Rous sarcoma virus enhancer/promoter" misc_feature 459..584 /label=HIV-1 Psi /note="packaging signal of human immunodeficiency virus type 1" misc_feature 1077..1310 /label=RRE /note="The Rev response element (RRE) of HIV-1 allows for Rev-dependent mRNA export from the nucleus to the cytoplasm." CDS 1495..1539 /codon_start=1 /label=gp41 peptide /note="antigenic peptide corresponding to amino acids 655 to 669 of the HIV envelope protein gp41 (Lutje Hulsik et al., 2013)" /translation="KNEQELLELDKWASL" promoter 1714..2214 /label=hPGK promoter /note="human phosphoglycerate kinase 1 promoter" CDS 2688..3401 /codon_start=1 /label=EGFP /note="enhanced GFP" /translation="VSKGEELFTGVVPILVELDGDVNGHKFSVSGEGEGDATYGKLTLK FICTTGKLPVPWPTLVTTLTYGVQCFSRYPDHMKQHDFFKSAMPEGYVQERTIFFKDDG NYKTRAEVKFEGDTLVNRIELKGIDFKEDGNILGHKLEYNYNSHNVYIMADKQKNGIKV NFKIRHNIEDGSVQLADHYQQNTPIGDGPVLLPDNHYLSTQSALSKDPNEKRDHMVLLE FVTAAGITLGMDELYK" misc_feature 3447..3564 /label=cPPT/CTS /note="central polypurine tract and central termination sequence of HIV-1" promoter 3682..3922 /label=U6 promoter /note="RNA polymerase III promoter for human U6 snRNA" misc_RNA 3939..4014 /label=gRNA scaffold /note="guide RNA scaffold for the Streptococcus pyogenes CRISPR/Cas9 system" misc_feature 4088..4676 /label=WPRE /note="woodchuck hepatitis virus posttranscriptional regulatory element" LTR 4748..4981 /label=3' LTR (Delta-U3) /note="self-inactivating 3' long terminal repeat (LTR) from HIV-1" polyA_signal 5059..5193 /label=SV40 poly(A) signal /note="SV40 polyadenylation signal" rep_origin 5220..5355 /label=SV40 ori /note="SV40 origin of replication" promoter complement(5376..5394) /label=T7 promoter /note="promoter for bacteriophage T7 RNA polymerase" primer_bind complement(5404..5420) /label=M13 fwd /note="common sequencing primer, one of multiple similar variants" rep_origin 5562..6017 /label=f1 ori /note="f1 bacteriophage origin of replication; arrow indicates direction of (+) strand synthesis" promoter 6043..6147 /label=AmpR promoter CDS 6148..7005 /codon_start=1 /label=AmpR /note="beta-lactamase" /translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI ELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYS PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRW EPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSA LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS LIKHW" rep_origin 7179..7767 /label=ori /note="high-copy-number ColE1/pMB1/pBR322/pUC origin of replication" protein_bind 8055..8076 /label=CAP binding site /note="CAP binding activates transcription in the presence of cAMP." promoter 8091..8121 /label=lac promoter /note="promoter for the E. coli lac operon" protein_bind 8129..8145 /label=lac operator /note="The lac repressor binds to the lac operator to inhibit transcription in E. coli. This inhibition can be relieved by adding lactose or isopropyl-beta-D-thiogalactopyranoside (IPTG)." primer_bind 8153..8169 /label=M13 rev /note="common sequencing primer, one of multiple similar variants" promoter 8190..8208 /label=T3 promoter /note="promoter for bacteriophage T3 RNA polymerase"
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