Basic Vector Information
- Vector Name:
- pLV2-U6-shRNA-Negative-Control-PGK-Hyg
- Antibiotic Resistance:
- Ampicillin
- Length:
- 7574 bp
- Type:
- Gene knockout
- Replication origin:
- ori
- Host:
- Mammalian cells, Lentivirus
- Selection Marker:
- Hyg
- Promoter:
- hPGK
- Growth Strain(s):
- Stbl3
- Growth Temperature:
- 37℃
pLV2-U6-shRNA-Negative-Control-PGK-Hyg vector Vector Map
Plasmid Resuspension Protocol:
1. Centrifuge at 5,000×g for 5 min.
2. Carefully open the tube and add 20 μl of sterile water to dissolve the DNA.
3. Close the tube and incubate for 10 minutes at room temperature.
4. Briefly vortex the tube and then do a quick spin to concentrate the liquid at the bottom. Speed is less than 5000×g.
5.Store the plasmid at -20 ℃.
pLV2-U6-shRNA-Negative-Control-PGK-Hyg vector Sequence
LOCUS V014126 7574 bp DNA circular SYN 01-JAN-1980
DEFINITION Exported.
ACCESSION V014126
VERSION V014126
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
.
REFERENCE 1 (bases 1 to 7574)
AUTHORS .
TITLE Direct Submission
FEATURES Location/Qualifiers
source 1..7574
/mol_type="other DNA"
/organism="synthetic DNA construct"
protein_bind 107..128
/label="CAP binding site"
/note="CAP binding activates transcription in the presence
of cAMP."
promoter 143..173
/label="lac promoter"
/note="promoter for the E. coli lac operon"
protein_bind 181..197
/label="lac operator"
/note="The lac repressor binds to the lac operator to
inhibit transcription in E. coli. This inhibition can be
relieved by adding lactose or
isopropyl-beta-D-thiogalactopyranoside (IPTG)."
primer_bind 205..221
/label="M13 rev"
/note="common sequencing primer, one of multiple similar
variants"
promoter 242..260
/label="T3 promoter"
/note="promoter for bacteriophage T3 RNA polymerase"
promoter 288..514
/label="RSV promoter"
/note="Rous sarcoma virus enhancer/promoter"
misc_feature 742..867
/label="HIV-1 Psi"
/note="packaging signal of human immunodeficiency virus
type 1"
misc_feature 1360..1593
/label="RRE"
/note="The Rev response element (RRE) of HIV-1 allows for
Rev-dependent mRNA export from the nucleus to the
cytoplasm."
CDS 1778..1822
/label="gp41 peptide"
/note="antigenic peptide corresponding to amino acids 655
to 669 of the HIV envelope protein gp41 (Lutje Hulsik et
al., 2013)"
CDS 1971..2012
/note="Protein Tat from Human immunodeficiency virus type 1
group M subtype B (isolate WMJ22). Accession#: P12509"
/label="Protein Tat"
promoter 2120..2360
/label="U6 promoter"
/note="RNA polymerase III promoter for human U6 snRNA"
misc_feature 2466..2583
/label="cPPT/CTS"
/note="central polypurine tract and central termination
sequence of HIV-1"
promoter 2632..3142
/label="hPGK promoter"
/note="human phosphoglycerate kinase 1 promoter"
CDS 3232..4254
/label="HygR"
/note="aminoglycoside phosphotransferase from E. coli"
primer_bind complement(4281..4297)
/label="KS primer"
/note="common sequencing primer, one of multiple similar
variants"
LTR 4380..4613
/label="3' LTR (Delta-U3)"
/note="self-inactivating 3' long terminal repeat (LTR) from
HIV-1"
polyA_signal 4685..4819
/label="SV40 poly(A) signal"
/note="SV40 polyadenylation signal"
rep_origin 4846..4981
/label="SV40 ori"
/note="SV40 origin of replication"
promoter complement(5002..5020)
/label="T7 promoter"
/note="promoter for bacteriophage T7 RNA polymerase"
primer_bind complement(5030..5046)
/label="M13 fwd"
/note="common sequencing primer, one of multiple similar
variants"
rep_origin 5188..5643
/label="f1 ori"
/note="f1 bacteriophage origin of replication; arrow
indicates direction of (+) strand synthesis"
promoter 5669..5773
/label="AmpR promoter"
CDS 5774..6631
/label="AmpR"
/note="beta-lactamase"
rep_origin 6805..7393
/direction=RIGHT
/label="ori"
/note="high-copy-number ColE1/pMB1/pBR322/pUC origin of
replication"
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