Basic Vector Information
- Vector Name:
- pLX-R3-TagRFP-T
- Antibiotic Resistance:
- Streptomycin
- Length:
- 6247 bp
- Type:
- Cloning vector
- Replication origin:
- oriV
- Host:
- Plants
- Source/Author:
- Pasin F, Bedoya LC, Bernabe-Orts JM, Gallo A, Simon-Mateo C, Orzaez D, Garcia JA.
- Promoter:
- CaMV 35S (enhanced)
pLX-R3-TagRFP-T vector Map
pLX-R3-TagRFP-T vector Sequence
LOCUS 40924_29401 6247 bp DNA circular SYN 18-DEC-2018
DEFINITION Cloning vector pLX-R3-TagRFP-T, complete sequence.
ACCESSION .
VERSION .
KEYWORDS .
SOURCE synthetic DNA construct
ORGANISM synthetic DNA construct
REFERENCE 1 (bases 1 to 6247)
AUTHORS Pasin F, Bedoya LC, Bernabe-Orts JM, Gallo A, Simon-Mateo C, Orzaez
D, Garcia JA.
TITLE Multiple T-DNA Delivery to Plants Using Novel Mini Binary Vectors
with Compatible Replication Origins
JOURNAL ACS Synth Biol (2017) In press
PUBMED 28657330
REFERENCE 2 (bases 1 to 6247)
AUTHORS Pasin F, Garcia JA.
TITLE Direct Submission
JOURNAL Submitted (26-MAR-2017) Department of Plant Molecular Genetics,
Centro Nacional de Biotecnologia (CNB-CSIC), Darwin 3, Madrid,
Madrid 28049, Spain
REFERENCE 3 (bases 1 to 6247)
TITLE Direct Submission
REFERENCE 4 (bases 1 to 6247)
AUTHORS .
TITLE Direct Submission
COMMENT SGRef: number: 1; type: "Journal Article"; journalName: "ACS Synth
Biol (2017) In press"
COMMENT SGRef: number: 2; type: "Journal Article"; journalName: "Submitted
(26-MAR-2017) Department of Plant Molecular Genetics, Centro
Nacional de Biotecnologia (CNB-CSIC), Darwin 3, Madrid, Madrid
28049, Spain"
COMMENT SGRef: number: 3; type: "Journal Article"
FEATURES Location/Qualifiers
source 1..6247
/mol_type="other DNA"
/organism="synthetic DNA construct"
misc_feature 1..24
/label=assembly linker
/note="assembly linker"
regulatory 25..72
/regulatory_class="terminator"
misc_feature 133..157
/label=LB T-DNA repeat
/note="left border repeat from octopine Ach5 T-DNA"
misc_feature 184..208
/label=LB T-DNA repeat
/note="left border repeat from nopaline C58 T-DNA"
promoter 535..1204
/label=CaMV 35S promoter (enhanced)
/note="cauliflower mosaic virus 35S promoter with a
duplicated enhancer region"
5'UTR 1204..1349
/label=PPV
/note="PPV"
CDS 1350..2060
/label=TagRFP-T
/note="photostable variant of TagRFP (Shaner et al., 2008)"
3'UTR 2236..2452
/label=PPV
/note="PPV"
terminator 2534..2786
/label=NOS terminator
/note="nopaline synthase terminator and poly(A) signal"
misc_feature 2851..2874
/label=RB
/note="RB"
regulatory complement(2939..2979)
/regulatory_class="terminator"
misc_feature 2989..3012
/label=assembly linker
/note="assembly linker"
CDS complement(3016..3804)
/label=SmR
/note="aminoglycoside adenylyltransferase (Murphy, 1985)"
misc_feature 4002..4025
/label=assembly linker
/note="assembly linker"
CDS complement(4079..5224)
/label=trfA
/note="trans-acting replication protein that binds to and
activates oriV"
rep_origin complement(5617..6148)
/direction=LEFT
/label=oriV
/note="incP origin of replication"
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