LOCUS V038437 7536 bp DNA circular SYN 01-JAN-1980 DEFINITION synthetic circular DNA. ACCESSION V038437 VERSION V038437 KEYWORDS . SOURCE . ORGANISM . . FEATURES Location/Qualifiers enhancer 50..429 /note="human cytomegalovirus immediate early enhancer" /label="CMV enhancer" promoter 430..633 /note="human cytomegalovirus (CMV) immediate early promoter" /label="CMV promoter" CDS 706..2262 /label="PDZK1(NM_002614)" /note="PDZK1(NM_002614)" /gene="PDZK1" CDS 2269..2292 /codon_start=1 /product="8xHis affinity tag" /transl_table=1 /translation="HHHHHHHH" /label="8xHis" misc_feature 2312..2900 /note="woodchuck hepatitis virus posttranscriptional regulatory element" /label="WPRE" polyA_signal 2966..3014 /note="herpes simplex virus thymidine kinase polyadenylation signal (Cole and Stacy, 1985)" /label="HSV TK poly(A) signal" rep_origin 3216..3644 /direction=RIGHT /note="f1 bacteriophage origin of replication; arrow indicates direction of (+) strand synthesis" /label="f1 ori" promoter 3658..3987 /note="SV40 enhancer and early promoter" /label="SV40 promoter" CDS 4054..4848 /codon_start=1 /gene="aph(3')-II (or nptII)" /note="confers resistance to neomycin, kanamycin, and G418 (Geneticin®)" /product="aminoglycoside phosphotransferase from Tn5" /transl_table=1 /translation="MIEQDGLHAGSPAAWVERLFGYDWAQQTIGCSDAAVFRLSAQGRP VLFVKTDLSGALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDLLS SHLAPAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQ GLAPAELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGVADRYQDIA LATRDIAEELGGEWADRFLVLYGIAAPDSQRIAFYRLLDEFF*" /label="NeoR/KanR" polyA_signal 5024..5145 /note="SV40 polyadenylation signal" /label="SV40 poly(A) signal" primer_bind complement(5194..5210) /note="common sequencing primer, one of multiple similar variants" /label="M13 rev" protein_bind 5218..5234 /bound_moiety="lac repressor encoded by lacI" /note="The lac repressor binds to the lac operator to inhibit transcription in E. coli. This inhibition can be relieved by adding lactose or isopropyl-β-D-thiogalactopyranoside (IPTG)." /label="lac operator" promoter complement(5242..5272) /note="promoter for the E. coli lac operon" /label="lac promoter" protein_bind 5287..5308 /bound_moiety="E. coli catabolite activator protein" /note="CAP binding activates transcription in the presence of cAMP." /label="CAP binding site" rep_origin complement(5596..6184) /direction=LEFT /note="high-copy-number ColE1/pMB1/pBR322/pUC origin of replication" /label="ori" CDS complement(6355..7215) /codon_start=1 /gene="bla" /note="confers resistance to ampicillin, carbenicillin, and related antibiotics" /product="β-lactamase" /transl_table=1 /translation="MSIQHFRVALIPFFAAFCLPVFA,HPETLVKVKDAEDQLGARVGY IELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEY SPVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDR WEPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRS ALPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGA SLIKHW*" /label="AmpR" promoter complement(7216..7320) /gene="bla" /label="AmpR promoter" ORIGIN 1 gttaggcgtt ttgcgctgct tcgcgatgta cgggccagat atacgcgttg acattgatta 61 ttgactagtt attaatagta atcaattacg gggtcattag ttcatagccc atatatggag 121 ttccgcgtta cataacttac ggtaaatggc ccgcctggct gaccgcccaa cgacccccgc 181 ccattgacgt caataatgac gtatgttccc atagtaacgc caatagggac tttccattga 241 cgtcaatggg tggagtattt acggtaaact gcccacttgg cagtacatca agtgtatcat 301 atgccaagta cgccccctat tgacgtcaat gacggtaaat ggcccgcctg gcattatgcc 361 cagtacatga ccttatggga ctttcctact tggcagtaca tctacgtatt agtcatcgct 421 attaccatgg tgatgcggtt ttggcagtac atcaatgggc gtggatagcg gtttgactca 481 cggggatttc caagtctcca ccccattgac gtcaatggga gtttgttttg gcaccaaaat 541 caacgggact ttccaaaatg tcgtaacaac tccgccccat tgacgcaaat gggcggtagg 601 cgtgtacggt gggaggtcta tataagcaga gctctggcta gcgtttaaac ttaagcttgg 661 taccgagctc ggatccacta gtccagtgtg gtggaattcg ccaccatgac ctccaccttc 721 aacccccgag aatgtaaact gtccaagcaa gaagggcaaa actatggctt cttcctgcga 781 attgagaagg acaccgaggg ccacctggtc cgggtggttg agaagtgtag cccagcagag 841 aaggctggcc ttcaagatgg agacagagtt cttaggatca atggtgtctt tgtggacaaa 901 gaagaacata tgcaggttgt ggatctggtc agaaagagtg ggaattcagt gactttacta 961 gttctggatg gggattccta tgagaaagca gtgaaaacac gggtggactt gaaagagttg 1021 ggtcaaagtc agaaggagca aggtttgagt gataatatac tttcccctgt gatgaatgga 1081 ggtgtgcaaa cttggaccca gccccggctc tgctatctcg tgaaggaagg aggcagctat 1141 ggcttctctc tgaaaactgt ccaaggtaaa aagggggtgt acatgactga tattacacct 1201 caaggtgtgg ctatgagagc tggagttctg gctgatgatc acttgattga agtgaatgga 1261 gagaatgtag aggatgccag ccatgaggaa gtggttgaaa aggtgaagaa gtcaggaagc 1321 cgtgtcatgt tcctgctggt ggacaaagaa actgacaagc gtcatgttga gcagaagata 1381 caattcaaaa gagaaacagc cagtttgaaa ctgttacccc accagccccg aattgtggag 1441 atgaagaaag gaagcaatgg ctatggtttc tatctgaggg caggctcaga acagaaaggt 1501 caaatcatca aggacataga ttctggaagt ccagcagagg aggctggctt gaagaacaat 1561 gatctggtag ttgctgtcaa cggcgagtct gtggaaaccc tggatcatga cagtgtggta 1621 gaaatgatta gaaagggtgg agatcagact tcactgttgg tggtagacaa agagacggac 1681 aacatgtaca gactggctca tttttctcca tttctctact atcaaagtca agaactgccc 1741 aatggctctg tcaaggaggc tccagctcct actcccactt ctctggaagt ctcaagtcca 1801 ccagatacta cagaggaagt agatcataag cctaaactct gcaggctggc taaaggtgaa 1861 aatggctatg gctttcactt aaatgcgatt cggggtctgc caggctcatt catcaaagag 1921 gtacagaagg gcggtcctgc tgacttggct gggctagagg atgaggatgt catcattgaa 1981 gtgaatgggg tgaatgtgct agatgaaccc tatgagaagg tggtggatag aatccagagc 2041 agtgggaaga atgtcacact tctagtctgt ggaaagaagg cctatgatta tttccaagct 2101 aagaaaatcc ctattgtttc ctccctggct gatccacttg acacccctcc agattctaaa 2161 gaaggaatag tggtggagtc aaaccatgac tcgcacatgg caaaagaacg ggcccacagt 2221 acagcctcac attcttcttc caattctgaa gatacagaga tgctcgagca ccatcaccat 2281 caccatcacc attagggccc gatatctcga caatcaacct ctggattaca aaatttgtga 2341 aagattgact ggtattctta actatgttgc tccttttacg ctatgtggat acgctgcttt 2401 aatgcctttg tatcatgcta ttgcttcccg tatggctttc attttctcct ccttgtataa 2461 atcctggttg ctgtctcttt atgaggagtt gtggcccgtt gtcaggcaac gtggcgtggt 2521 gtgcactgtg tttgctgacg caacccccac tggttggggc attgccacca cctgtcagct 2581 cctttccggg actttcgctt tccccctccc tattgccacg gcggaactca tcgccgcctg 2641 ccttgcccgc tgctggacag gggctcggct gttgggcact gacaattccg tggtgttgtc 2701 ggggaagctg acgtcctttc catggctgct cgcctgtgtt gccacctgga ttctgcgcgg 2761 gacgtccttc tgctacgtcc cttcggccct caatccagcg gaccttcctt cccgcggcct 2821 gctgccggct ctgcggcctc ttccgcgtct tcgccttcgc cctcagacga gtcggatctc 2881 cctttgggcc gcctccccgc ctggaaacgg gggaggctaa ctgaaacacg gaaggagaca 2941 ataccggaag gaacccgcgc tatgacggca ataaaaagac agaataaaac gcacgggtgt 3001 tgggtcgttt gttcataaac gcggggttcg gtcccagggc tggcactctg tcgatacccc 3061 accgagaccc cattggggcc aatacgcccg cgtttcttcc ttttccccac cccacccccc 3121 aagttcgggt gaaggcccag ggctcgcagc caacgtcggg gcggcaggcc ctgccatagc 3181 agatctgcgc agctggggct ctagggggta tccccacgcg ccctgtagcg gcgcattaag 3241 cgcggcgggt gtggtggtta cgcgcagcgt gaccgctaca cttgccagcg ccctagcgcc 3301 cgctcctttc gctttcttcc cttcctttct cgccacgttc gccggctttc cccgtcaagc 3361 tctaaatcgg ggcatccctt tagggttccg atttagtgct ttacggcacc tcgaccccaa 3421 aaaacttgat tagggtgatg gttcacgtag tgggccatcg ccctgataga cggtttttcg 3481 ccctttgacg ttggagtcca cgttctttaa tagtggactc ttgttccaaa ctggaacaac 3541 actcaaccct atctcggtct attcttttga tttataaggg attttgggga tttcggccta 3601 ttggttaaaa aatgagctga tttaacaaaa atttaacgcg aattaattct gtggaatgtg 3661 tgtcagttag ggtgtggaaa gtccccaggc tccccagcag gcagaagtat gcaaagcatg 3721 catctcaatt agtcagcaac caggtgtgga aagtccccag gctccccagc aggcagaagt 3781 atgcaaagca tgcatctcaa ttagtcagca accatagtcc cgcccctaac tccgcccatc 3841 ccgcccctaa ctccgcccag ttccgcccat tctccgcccc atggctgact aatttttttt 3901 atttatgcag aggccgaggc cgcctctgcc tctgagctat tccagaagta gtgaggaggc 3961 ttttttggag gcctaggctt ttgcaaaaag ctcccgggag cttgtatatc cattttcgga 4021 tctgatcaag agacaggatg aggatcgttt cgcatgattg aacaagatgg attgcacgca 4081 ggttctccgg ccgcttgggt ggagaggcta ttcggctatg actgggcaca acagacaatc 4141 ggctgctctg atgccgccgt gttccggctg tcagcgcagg ggcgcccggt tctttttgtc 4201 aagaccgacc tgtccggtgc cctgaatgaa ctgcaggacg aggcagcgcg gctatcgtgg 4261 ctggccacga cgggcgttcc ttgcgcagct gtgctcgacg ttgtcactga agcgggaagg 4321 gactggctgc tattgggcga agtgccgggg caggatctcc tgtcatctca ccttgctcct 4381 gccgagaaag tatccatcat ggctgatgca atgcggcggc tgcatacgct tgatccggct 4441 acctgcccat tcgaccacca agcgaaacat cgcatcgagc gagcacgtac tcggatggaa 4501 gccggtcttg tcgatcagga tgatctggac gaagagcatc aggggctcgc gccagccgaa 4561 ctgttcgcca ggctcaaggc gcgcatgccc gacggcgagg atctcgtcgt gacccatggc 4621 gatgcctgct tgccgaatat catggtggaa aatggccgct tttctggatt catcgactgt 4681 ggccggctgg gtgtggcgga ccgctatcag gacatagcgt tggctacccg tgatattgct 4741 gaagagcttg gcggcgaatg ggctgaccgc ttcctcgtgc tttacggtat cgccgctccc 4801 gattcgcagc gcatcgcctt ctatcgcctt cttgacgagt tcttctgagc gggactctgg 4861 ggttcgcgaa atgaccgacc aagcgacgcc caacctgcca tcacgagatt tcgattccac 4921 cgccgccttc tatgaaaggt tgggcttcgg aatcgttttc cgggacgccg gctggatgat 4981 cctccagcgc ggggatctca tgctggagtt cttcgcccac cccaacttgt ttattgcagc 5041 ttataatggt tacaaataaa gcaatagcat cacaaatttc acaaataaag catttttttc 5101 actgcattct agttgtggtt tgtccaaact catcaatgta tcttatcatg tctgtatacc 5161 gtcgacctct agctagagct tggcgtaatc atggtcatag ctgtttcctg tgtgaaattg 5221 ttatccgctc acaattccac acaacatacg agccggaagc ataaagtgta aagcctgggg 5281 tgcctaatga gtgagctaac tcacattaat tgcgttgcgc tcactgcccg ctttccagtc 5341 gggaaacctg tcgtgccagc tgcattaatg aatcggccaa cgcgcgggga gaggcggttt 5401 gcgtattggg cgctcttccg cttcctcgct cactgactcg ctgcgctcgg tcgttcggct 5461 gcggcgagcg gtatcagctc actcaaaggc ggtaatacgg ttatccacag aatcagggga 5521 taacgcagga aagaacatgt gagcaaaagg ccagcaaaag gccaggaacc gtaaaaaggc 5581 cgcgttgctg gcgtttttcc ataggctccg cccccctgac gagcatcaca aaaatcgacg 5641 ctcaagtcag aggtggcgaa acccgacagg actataaaga taccaggcgt ttccccctgg 5701 aagctccctc gtgcgctctc ctgttccgac cctgccgctt accggatacc tgtccgcctt 5761 tctcccttcg ggaagcgtgg cgctttctca atgctcacgc tgtaggtatc tcagttcggt 5821 gtaggtcgtt cgctccaagc tgggctgtgt gcacgaaccc cccgttcagc ccgaccgctg 5881 cgccttatcc ggtaactatc gtcttgagtc caacccggta agacacgact tatcgccact 5941 ggcagcagcc actggtaaca ggattagcag agcgaggtat gtaggcggtg ctacagagtt 6001 cttgaagtgg tggcctaact acggctacac tagaaggaca gtatttggta tctgcgctct 6061 gctgaagcca gttaccttcg gaaaaagagt tggtagctct tgatccggca aacaaaccac 6121 cgctggtagc ggtggttttt ttgtttgcaa gcagcagatt acgcgcagaa aaaaaggatc 6181 tcaagaagat cctttgatct tttctacggg gtctgacgct cagtggaacg aaaactcacg 6241 ttaagggatt ttggtcatga gattatcaaa aaggatcttc acctagatcc ttttaaatta 6301 aaaatgaagt tttaaatcaa tctaaagtat atatgagtaa acttggtctg acagttacca 6361 atgcttaatc agtgaggcac ctatctcagc gatctgtcta tttcgttcat ccatagttgc 6421 ctgactcccc gtcgtgtaga taactacgat acgggagggc ttaccatctg gccccagtgc 6481 tgcaatgata ccgcgagacc cacgctcacc ggctccagat ttatcagcaa taaaccagcc 6541 agccggaagg gccgagcgca gaagtggtcc tgcaacttta tccgcctcca tccagtctat 6601 taattgttgc cgggaagcta gagtaagtag ttcgccagtt aatagtttgc gcaacgttgt 6661 tgccattgct acaggcatcg tggtgtcacg ctcgtcgttt ggtatggctt cattcagctc 6721 cggttcccaa cgatcaaggc gagttacatg atcccccatg ttgtgcaaaa aagcggttag 6781 ctccttcggt cctccgatcg ttgtcagaag taagttggcc gcagtgttat cactcatggt 6841 tatggcagca ctgcataatt ctcttactgt catgccatcc gtaagatgct tttctgtgac 6901 tggtgagtac tcaaccaagt cattctgaga atagtgtatg cggcgaccga gttgctcttg 6961 cccggcgtca atacgggata ataccgcgcc acatagcaga actttaaaag tgctcatcat 7021 tggaaaacgt tcttcggggc gaaaactctc aaggatctta ccgctgttga gatccagttc 7081 gatgtaaccc actcgtgcac ccaactgatc ttcagcatct tttactttca ccagcgtttc 7141 tgggtgagca aaaacaggaa ggcaaaatgc cgcaaaaaag ggaataaggg cgacacggaa 7201 atgttgaata ctcatactct tcctttttca atattattga agcatttatc agggttattg 7261 tctcatgagc ggatacatat ttgaatgtat ttagaaaaat aaacaaatag gggttccgcg 7321 cacatttccc cgaaaagtgc cacctgacgt cgacggatcg ggagatctcc cgatccccta 7381 tggtcgactc tcagtacaat ctgctctgat gccgcatagt taagccagta tctgctccct 7441 gcttgtgtgt tggaggtcgc tgagtagtgc gcgagcaaaa tttaagctac aacaaggcaa 7501 ggcttgaccg acaattgcat gaagaatctg cttagg //